Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq3 113 4e-20 seq14 111 1e-19 >seq3 Length=1694370 Score = 113 bits (124), Expect = 4e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 ||||| ||||| || || ||||||| | | |||||| || ||||| || ||||| ||| Sbjct 423059 TCCTCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGGATGCCTTCCTTG 423118 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||||||||||||| | ||| ||||| | ||||| || | |||||| Sbjct 423119 TCCTGGATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACCTCGAGGGTGATG 423178 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || ||||| || |||||||||||||||| Sbjct 423179 GTCTTGCCTGTCAGAGTCTTGACAAAGATCTGCATGC 423215 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||| ||| | || |||||||| || | || ||||| || || | ||||| Sbjct 423513 CACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGACAGGGTACGGCCGTCCTC 423572 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 ||||| || || | ||||| | || ||||| || ||||| || || || ||||| | Sbjct 423573 AAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTG 423632 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 || || || |||||| | ||| ||||| | | ||||| || | |||||||| || Sbjct 423633 GATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGTGTGATGGTCTT 423692 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 ||||| ||||| || || |||||||||||||| Sbjct 423693 GCCAGTGAGAGTCTTGACGAAGATCTGCATGCT 423725 >seq14 Length=1069518 Score = 111 bits (122), Expect = 1e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || |||||||| || | ||| || ||| | ||| | |||||| Sbjct 1023499 ACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCA 1023440 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || || | ||||| | | ||||| || ||||||||||| || ||||| | | Sbjct 1023439 AGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 1023380 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTTT 94977 || || ||||||||| ||| |||||| || | ||||| |||| ||||| || || Sbjct 1023379 ATCTTGGCCTTGACGTTATCGATAGTGTC-GCTCGACTCGACCTCAAGAGTGATCGTCTT 1023321 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || ||||| || || ||||||||||| Sbjct 1023320 GCCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291 Score = 89.7 bits (98), Expect = 5e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || |||||||| || ||| | ||||| | | |||||||| || ||||| || || || Sbjct 1023673 TCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCCTCCTTA 1023614 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | || || ||||||||| ||| |||||| | || || || | |||||| Sbjct 1023613 TCCTGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAACCTCGAGTGTGATG 1023554 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || || || || || || ||||||||||||||||||| Sbjct 1023553 GTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATGC 1023517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448290645239640