Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq3 113 4e-20
seq14 111 1e-19
>seq3
Length=1694370
Score = 113 bits (124), Expect = 4e-20
Identities = 119/157 (76%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| ||||| || || ||||||| | | |||||| || ||||| || ||||| |||
Sbjct 423059 TCCTCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGGATGCCTTCCTTG 423118
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | ||||||||||||||| | ||| ||||| | ||||| || | ||||||
Sbjct 423119 TCCTGGATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACCTCGAGGGTGATG 423178
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| || || || ||||| || ||||||||||||||||
Sbjct 423179 GTCTTGCCTGTCAGAGTCTTGACAAAGATCTGCATGC 423215
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||| ||| | || |||||||| || | || ||||| || || | |||||
Sbjct 423513 CACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGACAGGGTACGGCCGTCCTC 423572
Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917
||||| || || | ||||| | || ||||| || ||||| || || || ||||| |
Sbjct 423573 AAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTG 423632
Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977
|| || || |||||| | ||| ||||| | | ||||| || | |||||||| ||
Sbjct 423633 GATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGTGTGATGGTCTT 423692
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010
||||| ||||| || || ||||||||||||||
Sbjct 423693 GCCAGTGAGAGTCTTGACGAAGATCTGCATGCT 423725
>seq14
Length=1069518
Score = 111 bits (122), Expect = 1e-19
Identities = 152/210 (72%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||||||| | || |||||||| || | ||| || ||| | ||| | ||||||
Sbjct 1023499 ACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCA 1023440
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| || || | ||||| | | ||||| || ||||||||||| || ||||| | |
Sbjct 1023439 AGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGA 1023380
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGACGTCAATCGTGATGGTTTT 94977
|| || ||||||||| ||| |||||| || | ||||| |||| ||||| || ||
Sbjct 1023379 ATCTTGGCCTTGACGTTATCGATAGTGTC-GCTCGACTCGACCTCAAGAGTGATCGTCTT 1023321
Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || ||||| || || |||||||||||
Sbjct 1023320 GCCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291
Score = 89.7 bits (98), Expect = 5e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| |||||||| || ||| | ||||| | | |||||||| || ||||| || || ||
Sbjct 1023673 TCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCCTCCTTA 1023614
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || ||||||||| ||| |||||| | || || || | ||||||
Sbjct 1023613 TCCTGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAACCTCGAGTGTGATG 1023554
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
|| || || || || || |||||||||||||||||||
Sbjct 1023553 GTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATGC 1023517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448290645239640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |