Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 150 3e-32 seq5 136 6e-28 >seq3 Length=1694370 Score = 150 bits (166), Expect = 3e-32 Identities = 122/145 (84%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||||||||||||| |||| |||||| || |||||||| || || |||||||| |||| Sbjct 953956 CGCTAAGCGTCATCGCAAGAT-TCTTCGTGACAACATCCAGGGTATTACCAAGCCCGCTA 954014 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| ||||| |||||||||||||| || |||||| |||| || | |||| ||||||| Sbjct 954015 TCCGCCGTCTCGCTCGTCGTGGTGGTGTAAAGCGTATCTCGGGTCTCATCTACGAAGAGA 954074 Query 16551 TTCGTGATGTTTTGAAGATCTTCCT 16575 ||||| |||| | ||||||||||| Sbjct 954075 CTCGTGGTGTTCTCAAGATCTTCCT 954099 >seq5 Length=1492030 Score = 136 bits (150), Expect = 6e-28 Identities = 121/149 (81%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGC-AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 ||||||||||||||| ||||| ||||| || |||||||| || ||||||||||| || || Sbjct 247062 GCTAAGCGTCATCGCAAGATC-CTTCGCGACAACATCCAGGGTATCACCAAGCCCGCAAT 247120 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| || ||||||||||| || |||||| |||| || | | || || |||| Sbjct 247121 TCGCCGTCTCGCCCGTCGTGGTGGTGTTAAGCGTATCTCCGGCCTCATTTACGAGGAGAC 247180 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGA 16580 |||| |||| |||||||||||||| ||| Sbjct 247181 CCGTGGTGTTCTGAAGATCTTCCTCGAGA 247209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075109483607