Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq6 136 1e-26
>seq6
Length=1460661
Score = 136 bits (150), Expect = 1e-26
Identities = 419/650 (64%), Gaps = 55/650 (8%)
Strand=Plus/Plus
Query 363415 TCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGT 363474
|||||||| | || ||||| || | ||| || || || ||||| ||| | ||||||
Sbjct 1096198 TCCTACCTCTTGCGGATCAACGGCAAAGTTGCCGAGCGACCCCAGCAGATGCTGATGCGT 1096257
Query 363475 GTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG-ATT-GAAACATATAAGCTTC 363532
|| || |||||||| || ||| ||| |||| ||||| ||| | ||| || | ||
Sbjct 1096258 GTAGCCATTGGTATACACGGCCGAGATATTGA--CCGCGCATTAGCAACCTACACCCTGA 1096315
Query 363533 TAAGTGCTCGTGTA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAAT 363591
| | || ||| ||||| ||||| | || || | | |||||| || || | ||
Sbjct 1096316 TGTCCGAGCG-GTACTTCACACACGCTAGCCCGACGCTCTTCAATGCCGGCACGCCCCAT 1096374
Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651
|| ||| | ||||| || || || | ||||||||||| |||||||| |||| |
Sbjct 1096375 CCTCAGCTCTCTTCCTGTTTCCTGGTTGCCATGAAGGACGACAGTATCGAGGGCATCTAT 1096434
Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711
|| || || |||| || || | |||||||||| || || || ||||| | |||
Sbjct 1096435 GATACCCTCAAGACATGCGCAATGATTTCCAAGACCGCTGGTGGTATTGGAATGCACATC 1096494
Query 363712 CACAATGTTCG-------------------------------------TGCACAGAACA- 363733
|||||| | || ||| | || ||
Sbjct 1096495 CACAATATCCGCGCCAAGGGGTGAGTAATCTGGCGATGAGTCATCCGCTGCTCTGACCAT 1096554
Query 363734 GT---------TACATTCGCGG-CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783
|| ||||| ||||| ||| || |||||||| || | || ||||||||
Sbjct 1096555 GTCTCAGCTCCTACAT-CGCGGGCACCAATGGCTACTCGAACGGTATCGTCCCCATGCTC 1096613
Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843
|||| | || |||||| | ||||||||||| || || |||||| || ||
Sbjct 1096614 CGTGCTTACGATGCTACTGCTCGCTACGTCGACCAAGGCGGTAACAAGCGCCCCGGTGCC 1096673
Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903
|||||||| || ||||||| || ||||| | || ||||| || || || || ||
Sbjct 1096674 TTTGCTATCTACATCGAGCCCTGGCACGCCGACGTCTTCGAGTTCCTCGACCTGCGCAAG 1096733
Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963
||| || || |||||| |||| |||||||| || ||||| || || ||| |||| ||
Sbjct 1096734 AACCACGGCAAGGAGGAAGTGCGCGCACGTGACCTTTTCTACGCCCTCTGGATTTCAGAT 1096793
Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCC 364013
| || ||||||||||| ||| | | | ||||| ||||| |||||
Sbjct 1096794 CTGTTCATGAAGCGCGTCGAGTCCGACGGTGACTGGTCTCTCTTCTGCCC 1096843
Score = 91.5 bits (100), Expect = 4e-13
Identities = 172/253 (68%), Gaps = 4/253 (2%)
Strand=Plus/Minus
Query 363736 TACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795
|||||| ||||| || ||||| || || | ||||||||||| ||| | |||
Sbjct 567205 TACATTGCAGGCACTAATGGCTACTCAAACGGTATCATTCCCATGCTTTGTGCTTATGAT 567146
Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855
| ||||| ||| | |||| ||||| ||| ||| || || || |||| |||
Sbjct 567145 ACCACTGCTCCCTACATTGACCTAGGTGGCAACAAGTGCACTGGTGCCTTCACTATCTAT 567086
Query 363856 C----TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGG 363911
| | |||||| |||||| |||| |||||||| ||||| || | || ||| ||
Sbjct 567085 CTATTTTGAGCCTTGGCATGCCAATATCTTTGAGTTCCTTGATCTGCACAAGAACCATGG 567026
Query 363912 AAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTAT 363971
| ||| ||| || | ||||||| || |||||||| || ||| |||| || | | ||
Sbjct 567025 CACAGATGAAGTGTGCACACGTGACCTTTTCTATGCCCTCTGGATTTCAGATCTGTCCAT 566966
Query 363972 GAAGCGCGTGGAG 363984
||||| || |||
Sbjct 566965 GAAGCATGTTGAG 566953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303351946777418
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |