Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq6 136 1e-26 >seq6 Length=1460661 Score = 136 bits (150), Expect = 1e-26 Identities = 419/650 (64%), Gaps = 55/650 (8%) Strand=Plus/Plus Query 363415 TCCTACCTATCTCGTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGT 363474 |||||||| | || ||||| || | ||| || || || ||||| ||| | |||||| Sbjct 1096198 TCCTACCTCTTGCGGATCAACGGCAAAGTTGCCGAGCGACCCCAGCAGATGCTGATGCGT 1096257 Query 363475 GTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG-ATT-GAAACATATAAGCTTC 363532 || || |||||||| || ||| ||| |||| ||||| ||| | ||| || | || Sbjct 1096258 GTAGCCATTGGTATACACGGCCGAGATATTGA--CCGCGCATTAGCAACCTACACCCTGA 1096315 Query 363533 TAAGTGCTCGTGTA-TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAAT 363591 | | || ||| ||||| ||||| | || || | | |||||| || || | || Sbjct 1096316 TGTCCGAGCG-GTACTTCACACACGCTAGCCCGACGCTCTTCAATGCCGGCACGCCCCAT 1096374 Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651 || ||| | ||||| || || || | ||||||||||| |||||||| |||| | Sbjct 1096375 CCTCAGCTCTCTTCCTGTTTCCTGGTTGCCATGAAGGACGACAGTATCGAGGGCATCTAT 1096434 Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711 || || || |||| || || | |||||||||| || || || ||||| | ||| Sbjct 1096435 GATACCCTCAAGACATGCGCAATGATTTCCAAGACCGCTGGTGGTATTGGAATGCACATC 1096494 Query 363712 CACAATGTTCG-------------------------------------TGCACAGAACA- 363733 |||||| | || ||| | || || Sbjct 1096495 CACAATATCCGCGCCAAGGGGTGAGTAATCTGGCGATGAGTCATCCGCTGCTCTGACCAT 1096554 Query 363734 GT---------TACATTCGCGG-CACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 || ||||| ||||| ||| || |||||||| || | || |||||||| Sbjct 1096555 GTCTCAGCTCCTACAT-CGCGGGCACCAATGGCTACTCGAACGGTATCGTCCCCATGCTC 1096613 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 |||| | || |||||| | ||||||||||| || || |||||| || || Sbjct 1096614 CGTGCTTACGATGCTACTGCTCGCTACGTCGACCAAGGCGGTAACAAGCGCCCCGGTGCC 1096673 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 |||||||| || ||||||| || ||||| | || ||||| || || || || || Sbjct 1096674 TTTGCTATCTACATCGAGCCCTGGCACGCCGACGTCTTCGAGTTCCTCGACCTGCGCAAG 1096733 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| || || |||||| |||| |||||||| || ||||| || || ||| |||| || Sbjct 1096734 AACCACGGCAAGGAGGAAGTGCGCGCACGTGACCTTTTCTACGCCCTCTGGATTTCAGAT 1096793 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCC 364013 | || ||||||||||| ||| | | | ||||| ||||| ||||| Sbjct 1096794 CTGTTCATGAAGCGCGTCGAGTCCGACGGTGACTGGTCTCTCTTCTGCCC 1096843 Score = 91.5 bits (100), Expect = 4e-13 Identities = 172/253 (68%), Gaps = 4/253 (2%) Strand=Plus/Minus Query 363736 TACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795 |||||| ||||| || ||||| || || | ||||||||||| ||| | ||| Sbjct 567205 TACATTGCAGGCACTAATGGCTACTCAAACGGTATCATTCCCATGCTTTGTGCTTATGAT 567146 Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855 | ||||| ||| | |||| ||||| ||| ||| || || || |||| ||| Sbjct 567145 ACCACTGCTCCCTACATTGACCTAGGTGGCAACAAGTGCACTGGTGCCTTCACTATCTAT 567086 Query 363856 C----TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGG 363911 | | |||||| |||||| |||| |||||||| ||||| || | || ||| || Sbjct 567085 CTATTTTGAGCCTTGGCATGCCAATATCTTTGAGTTCCTTGATCTGCACAAGAACCATGG 567026 Query 363912 AAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTAT 363971 | ||| ||| || | ||||||| || |||||||| || ||| |||| || | | || Sbjct 567025 CACAGATGAAGTGTGCACACGTGACCTTTTCTATGCCCTCTGGATTTCAGATCTGTCCAT 566966 Query 363972 GAAGCGCGTGGAG 363984 ||||| || ||| Sbjct 566965 GAAGCATGTTGAG 566953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303351946777418