Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq14 140 3e-28 seq3 123 2e-23 seq5 86.0 6e-12 >seq14 Length=1069518 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | || | || |||||||| || |||||||| |||||| Sbjct 1024201 CCACCACGGAGACGAAGGACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTC 1024142 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | |||||||||||| |||||| Sbjct 1024141 AGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGG 1024082 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | || ||| ||||||||| Sbjct 1024081 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGACTCGACT 1024022 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || || || | ||| || |||||||||||||| Sbjct 1024021 TCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAAATCTGCAT 1023975 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || || || | ||| || ||||| || |||||||| ||| Sbjct 1023518 GCCACCACGGAGACGAAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGA 1023459 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| ||||| |||||||| || ||| |||| | ||||||||||| ||||| Sbjct 1023458 GAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGG 1023399 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| || || ||||| | || | ||| ||| | ||||||| Sbjct 1023398 AATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGACTCGAC 1023339 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || ||||| ||||| || ||||| |||||||| Sbjct 1023338 CTCAAGAGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||||||||| | ||| | ||| |||||||| || || ||||| ||| Sbjct 1023973 CCACCACGGAGACGCAGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAA 1023914 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||| || |||||| Sbjct 1023913 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGG 1023854 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| || || ||||| | || | ||||| | || |||| Sbjct 1023853 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGACT 1023794 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | ||| || || || | || || ||||| || ||||| Sbjct 1023793 TCGAGCGTGATGGTCTTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| ||||| | || | || |||||||| ||||||||||| || Sbjct 1023745 CCACCGCGGAGACGAAGCACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGAG 1023686 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||| || ||||||||||| ||| |||| | ||||||||| || || || Sbjct 1023685 AGTGTGCGACCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGA 1023626 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || || || ||| || ||||| | || | ||| || | ||||| | Sbjct 1023625 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAACC 1023566 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | ||| || ||||| || || || || || ||||||||| Sbjct 1023565 TCGAGTGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATG 1023518 >seq3 Length=1694370 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| ||||| | || | ||| || ||||| || || |||||||| | Sbjct 423496 CCACCACGGAGACGAAGCACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGAC 423555 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||| || |||||| ||||||||||| ||| |||| | | ||||||||| |||||| Sbjct 423556 AGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGG 423615 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| || |||| | || | || || | |||||||| Sbjct 423616 ATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 423675 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| || | ||| || || || ||||| || ||||| ||||||||| Sbjct 423676 TCGAGTGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCATG 423723 Score = 120 bits (132), Expect = 3e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| ||||| | || | ||||||||||| || || ||||| || Sbjct 422986 GCCGCCACGGAGACGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGA 423045 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| |||||| ||||||||||| || |||| | || |||||||| ||||| Sbjct 423046 AAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGG 423105 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| ||||| ||||| |||||| ||||| | || | || || | ||||||| Sbjct 423106 GATGCCTTCCTTGTCCTGGATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGAC 423165 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 |||| ||| | ||| || || || ||||| || || || ||||||||| Sbjct 423166 CTCGAGGGTGATGGTCTTGCCTGTCAGAGTCTTGACAAAGATCTGCATG 423214 Score = 96.9 bits (106), Expect = 3e-15 Identities = 95/123 (77%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| |||||||| || | ||| || ||||| ||||||||||| || Sbjct 423214 GCCACCCCGGAGACGAAGCACTAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCCGA 423273 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| |||||| ||||||||||| ||| |||| | | ||||||||| ||||| Sbjct 423274 AAGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCAGGAGG 423333 Query 131127 GAT 131129 ||| Sbjct 423334 GAT 423336 >seq5 Length=1492030 Score = 86.0 bits (94), Expect = 6e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||| || | ||| | ||| || ||||| || |||||||| || | Sbjct 1092186 CCACCACGCAGACGCAAGACGAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 1092245 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| |||||||||||||| |||| | || ||||| || |||||| Sbjct 1092246 AGGGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATCAGGCGTTGCTGATCAGGAGGG 1092305 Query 131128 AT 131129 || Sbjct 1092306 AT 1092307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012215884160