Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq8 122 6e-23 seq17 87.8 1e-12 >seq8 Length=1312413 Score = 122 bits (134), Expect = 6e-23 Identities = 84/95 (88%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||| ||||| |||| || |||||||| Sbjct 827873 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGAGCGTAGACAGGGACAGTGGGAATCTCGT 827814 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||| ||||||||||| Sbjct 827813 TAATCCATTCATGCGCGTCACTAGTTAGATGACGA 827779 Score = 104 bits (114), Expect = 2e-17 Identities = 69/77 (90%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||| ||||||| |||||||||||||||||||||||||||||||||| | Sbjct 825620 CTCTCTTTCCAAAGTGCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 825561 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 825560 GCCAATATTTAGCTTTA 825544 >seq17 Length=872506 Score = 87.8 bits (96), Expect = 1e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 6201 TTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAACGGTATT 6260 |||||||| ||| ||||| | | | | ||||| ||||| || ||||| || ||| Sbjct 60912 TTCTACCGTTACCGCATGCCCATCCTTCTCACTAAGGTGGAGGGCAAAGGAAATGGAATT 60853 Query 6261 AAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCCACCTAC 6320 || || ||| | || || || || || ||| || ||| | ||||| | | ||| Sbjct 60852 AAGACTGTCCTGCCGAATATCCCGGATGTTGCTCGTGCTCTCAGCCGCCCGCCTATTTAC 60793 Query 6321 CCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAAAACGAG 6380 || || || ||||| |||| ||| || ||||| |||||| || || |||| ||| Sbjct 60792 CCCACCAAGTATTTTGGGTCCGAGCTCGGCGCACAGACGATGTACGACTCCAAAGCCGAC 60733 Query 6381 CGCTTCATCGTTAACGGATCGCATAACTCTG 6411 ||||||||||| ||||| |||| | |||| Sbjct 60732 CGCTTCATCGTCAACGGCGCGCACCAGTCTG 60702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946795865269