Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq14 136 3e-27 seq3 87.8 2e-12 >seq14 Length=1069518 Score = 136 bits (150), Expect = 3e-27 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || ||| |||||||||| || || | | | Sbjct 1023291 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACTCTTGAGGTCGAGTCGAGC 1023350 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || ||||| ||||||||||||||||| || || || Sbjct 1023351 GACACTATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 1023410 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || || || || ||| | |||||| ||||||| ||||||| |||||| Sbjct 1023411 CAGCGCCTTATCTTCGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 1023470 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTT 22428 || || || ||||||||| | || || ||| Sbjct 1023471 ATCCAGAAGGAATCCACCCTTCACTTGGTT 1023500 Score = 131 bits (144), Expect = 1e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || || ||||| || || || ||| ||||||| ||||| || ||| | Sbjct 1023975 ATGCAGATTTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAAGTCGAGTCCAGC 1024034 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || | || || || || |||||||||||||| || ||||| || Sbjct 1024035 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAG 1024094 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || |||||||| || || ||||| ||| | |||||| |||||| | ||| |||||| Sbjct 1024095 CAGCGTCTTATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAAC 1024154 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 1024155 ATCCAGAAGGAGTCCAC 1024171 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || || || || || || |||| || ||||| ||| | | Sbjct 1023747 ATGCAAATCTTCGTCAAGACGTTGACGGGAAAGACCATCACGCTCGAAGTCGAATCGTCG 1023806 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | |||| || ||||| ||||||||||| || || |||||||| Sbjct 1023807 GATACCATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGATCAG 1023866 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| ||| | ||||| |||||| | ||||| ||||| Sbjct 1023867 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCCGACTACAAT 1023926 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || || || || ||| | ||| | || |||| | || || ||| Sbjct 1023927 ATCCAGAAGGAGTCTACCCTTCATCTCGTGCTGCGTCTCCGTGGTGGT 1023974 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| || || || || | | Sbjct 1023519 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACACTCGAGGTTGAGTCATCG 1023578 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | || | |||| || || || || |||||||| ||||| || ||||| Sbjct 1023579 GACACTATCGATAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCTGATCAG 1023638 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || |||||||| ||| | || || ||||| |||| || |||||| Sbjct 1023639 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGTCGCACACTCTCGGACTACAAC 1023698 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 1023699 ATTCAGAAGGAGTCAAC 1023715 >seq3 Length=1694370 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | || || || || |||| || || || || || | Sbjct 423722 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACACTCGAGGTCGAGTCCTCG 423663 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | ||||| || || || ||||||||||| || || || || || Sbjct 423662 GACACGATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 423603 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | || || || || ||||| ||| | ||||| ||| ||| | || |||||||| Sbjct 423602 CAGAGGCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACCCTGTCGGATTACAAT 423543 Query 22399 ATTCAAAAAGAATCCACC 22416 || || || ||||||||| Sbjct 423542 ATCCAGAAGGAATCCACC 423525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727493571935