Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq2 154 3e-32
seq1 84.2 4e-11
>seq2
Length=2036205
Score = 154 bits (170), Expect = 3e-32
Identities = 370/551 (67%), Gaps = 24/551 (4%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
||||||||||| || |||| ||||| || || || |||| ||||| ||||| |||
Sbjct 1681554 GGTGAGGATCTTTGCAACTGCACGTTCTCCCTGGCGTACGGTGCTAAGATCCTGCTCAAC 1681495
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|| | |||| | ||||||||||| |||| || ||||| ||||| |||||| |
Sbjct 1681494 ACTGCTACCCTCCGCCTCAAGCGTGGCCACCGTTACGGTCTTTGCGGTCGCAATGGTTCC 1681435
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| || || ||| | || || | ||||| ||| | || || || || | |
Sbjct 1681434 GGCAAGTCTACGCTCATGAGGGCTATCGTCAACGGCCAGGTCGAGGGCTTCCCGTCCCCC 1681375
Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCACT 279584
||||| | || | || || |||||||||||||| || | || | | |
Sbjct 1681374 GACGAGGTTCGCACCTTCTACGTCGAGCACGACATCGATGGTTCCGAGGCTGAGATCGGT 1681315
Query 279585 GTGTTCGACT---TCCT-AACGTCTGACAATCAGGTTATGGAAATCAGCTCTCCT--GAG 279638
| | || | |||| |||| |||| | | | ||| || |||| |||
Sbjct 1681314 ATCCTTGAATGGGTCCTGAACG----ACAAGCG---TCTCGAA----GC-CTCCAAGGAG 1681267
Query 279639 GAAATCATCCAGAAACTGGAGGCCAATGGTTTT---GATGAAAGAATGCGTAATCTGCCA 279695
|| |||||| ||| || | || || || ||||| || || | |||||||
Sbjct 1681266 GAGATCATCGAGACCCTCGCTTCCGTCGGCTTCAGCGATGAGAGGCAGC--AGTCTGCCA 1681209
Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755
| || || ||||| ||||| |||||||||||||| || ||| |||||||||| || |
Sbjct 1681208 -TCGGCTCCCTGTCTGGTGGGTGGAAGATGAAGCTCGCTCTCGCTCGCGCCATGCTGTTC 1681150
Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815
||||| |||| ||||| |||||||| || ||||| | ||| |||||| ||
Sbjct 1681149 AAGGCCGACATCCTCCTGCTCGATGAGCCCACGAACCATCTTGACGTTGTCAACGTTGCT 1681090
Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGAC 279875
||||| | | |||||| ||||| || |||| ||||| |||| ||||| ||||||
Sbjct 1681089 TGGCTCGAGAACTACCTCACCAGCCTCAAGACCTGCACTTCCATCATCGTCTCCCACGAC 1681030
Query 279876 TCTGGCTTCCT 279886
||||| |||||
Sbjct 1681029 TCTGGTTTCCT 1681019
Score = 93.3 bits (102), Expect = 9e-14
Identities = 131/182 (72%), Gaps = 3/182 (2%)
Strand=Plus/Minus
Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238
|| ||||| ||| | || ||||| ||||| |||| | || | |||||| | || ||
Sbjct 1680723 GGTCCCAACGGTTCCGGCAAGTCGACCCTCGTCAAGCTGCTCATTGGCGATATGGAGCCC 1680664
Query 280239 ACTGAGGG--GTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295
| |||| || | | |||||||| || ||| || || | ||||| || ||||||
Sbjct 1680663 AACAAGGGTGGTGAGATCTGGAAGCACCCTAACTTGGTTATCGGCTACGTTGCCCAGCAC 1680604
Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355
||||||||||| || || ||||||| |||| ||||||| | | ||||| | ||||||
Sbjct 1680603 GCTTTCCACCATATTGACCACCACCTCGACAAGACTCCTCTCGAGTACATGCTCTGGCGC 1680544
Query 280356 TA 280357
||
Sbjct 1680543 TA 1680542
>seq1
Length=2114445
Score = 84.2 bits (92), Expect = 4e-11
Identities = 121/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Minus
Query 251544 ATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCAT 251603
||| || ||||| || |||||||| || | ||| |||| || ||||| || |||||
Sbjct 847929 ATAGTCCGATACTCGTTTCTCGAAGAAGTTTGTCTTTCCCTGAAGGGAGATGAGGTCCAT 847870
Query 251604 GAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCG 251663
||||||||||||||| ||| | || || ||| | ||| || || || | | |||
Sbjct 847869 GAAGTCGAAGGGGTTCGTGACGTTATAGACCTTCTCGTTGCCGAGAGCGACAAGAAGGCG 847810
Query 251664 GTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714
|| || || ||||| | ||||| ||| || | ||||||||||| ||
Sbjct 847809 ATCGGCGACGAACTCTATGTACTGGTTCATTAGGTTCGAGTTCATGCCGAT 847759
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027835496253259
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |