Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2 154 3e-32 seq1 84.2 4e-11 >seq2 Length=2036205 Score = 154 bits (170), Expect = 3e-32 Identities = 370/551 (67%), Gaps = 24/551 (4%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||||||||| || |||| ||||| || || || |||| ||||| ||||| ||| Sbjct 1681554 GGTGAGGATCTTTGCAACTGCACGTTCTCCCTGGCGTACGGTGCTAAGATCCTGCTCAAC 1681495 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 || | |||| | ||||||||||| |||| || ||||| ||||| |||||| | Sbjct 1681494 ACTGCTACCCTCCGCCTCAAGCGTGGCCACCGTTACGGTCTTTGCGGTCGCAATGGTTCC 1681435 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| || || ||| | || || | ||||| ||| | || || || || | | Sbjct 1681434 GGCAAGTCTACGCTCATGAGGGCTATCGTCAACGGCCAGGTCGAGGGCTTCCCGTCCCCC 1681375 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAGCACT 279584 ||||| | || | || || |||||||||||||| || | || | | | Sbjct 1681374 GACGAGGTTCGCACCTTCTACGTCGAGCACGACATCGATGGTTCCGAGGCTGAGATCGGT 1681315 Query 279585 GTGTTCGACT---TCCT-AACGTCTGACAATCAGGTTATGGAAATCAGCTCTCCT--GAG 279638 | | || | |||| |||| |||| | | | ||| || |||| ||| Sbjct 1681314 ATCCTTGAATGGGTCCTGAACG----ACAAGCG---TCTCGAA----GC-CTCCAAGGAG 1681267 Query 279639 GAAATCATCCAGAAACTGGAGGCCAATGGTTTT---GATGAAAGAATGCGTAATCTGCCA 279695 || |||||| ||| || | || || || ||||| || || | ||||||| Sbjct 1681266 GAGATCATCGAGACCCTCGCTTCCGTCGGCTTCAGCGATGAGAGGCAGC--AGTCTGCCA 1681209 Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755 | || || ||||| ||||| |||||||||||||| || ||| |||||||||| || | Sbjct 1681208 -TCGGCTCCCTGTCTGGTGGGTGGAAGATGAAGCTCGCTCTCGCTCGCGCCATGCTGTTC 1681150 Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815 ||||| |||| ||||| |||||||| || ||||| | ||| |||||| || Sbjct 1681149 AAGGCCGACATCCTCCTGCTCGATGAGCCCACGAACCATCTTGACGTTGTCAACGTTGCT 1681090 Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCACGAC 279875 ||||| | | |||||| ||||| || |||| ||||| |||| ||||| |||||| Sbjct 1681089 TGGCTCGAGAACTACCTCACCAGCCTCAAGACCTGCACTTCCATCATCGTCTCCCACGAC 1681030 Query 279876 TCTGGCTTCCT 279886 ||||| ||||| Sbjct 1681029 TCTGGTTTCCT 1681019 Score = 93.3 bits (102), Expect = 9e-14 Identities = 131/182 (72%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| | || ||||| ||||| |||| | || | |||||| | || || Sbjct 1680723 GGTCCCAACGGTTCCGGCAAGTCGACCCTCGTCAAGCTGCTCATTGGCGATATGGAGCCC 1680664 Query 280239 ACTGAGGG--GTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | |||| || | | |||||||| || ||| || || | ||||| || |||||| Sbjct 1680663 AACAAGGGTGGTGAGATCTGGAAGCACCCTAACTTGGTTATCGGCTACGTTGCCCAGCAC 1680604 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 ||||||||||| || || ||||||| |||| ||||||| | | ||||| | |||||| Sbjct 1680603 GCTTTCCACCATATTGACCACCACCTCGACAAGACTCCTCTCGAGTACATGCTCTGGCGC 1680544 Query 280356 TA 280357 || Sbjct 1680543 TA 1680542 >seq1 Length=2114445 Score = 84.2 bits (92), Expect = 4e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 251544 ATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCAT 251603 ||| || ||||| || |||||||| || | ||| |||| || ||||| || ||||| Sbjct 847929 ATAGTCCGATACTCGTTTCTCGAAGAAGTTTGTCTTTCCCTGAAGGGAGATGAGGTCCAT 847870 Query 251604 GAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCG 251663 ||||||||||||||| ||| | || || ||| | ||| || || || | | ||| Sbjct 847869 GAAGTCGAAGGGGTTCGTGACGTTATAGACCTTCTCGTTGCCGAGAGCGACAAGAAGGCG 847810 Query 251664 GTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 || || || ||||| | ||||| ||| || | ||||||||||| || Sbjct 847809 ATCGGCGACGAACTCTATGTACTGGTTCATTAGGTTCGAGTTCATGCCGAT 847759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835496253259