Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1 190 4e-43 seq6 138 2e-27 >seq1 Length=2114445 Score = 190 bits (210), Expect = 4e-43 Identities = 426/627 (68%), Gaps = 31/627 (5%) Strand=Plus/Plus Query 42529 TAGCCATAGAGAACGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGG 42588 || ||| |||||| | ||||| ||| ||| | ||| | |||| |||||| || Sbjct 847319 TACCCAGGGAGAACATCCACTCAGAGACATACTCTCTCCTGATTGACACATACATCAAGG 847378 Query 42589 ATCCCGTCGAGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGA 42648 || ||| ||||| | || ||| | ||||| || || || || ||||| ||| | Sbjct 847379 ATGCCGAACAGCGTGAATATCTCTTCGATGCCATTGATACCATTCCATGCATTAAGCGCA 847438 Query 42649 AGGCGGACTGGGCGCTCAACTGGATCGAGAGTCCCGACG--CAACGTTCGGCGAGAGGCT 42706 |||| |||||||| | || |||||| | | | | || | || || | || | || Sbjct 847439 AGGCCGACTGGGCATTGAAATGGATCTCG-GACAAG-CGTTCGACCTTTGCTGAACGTCT 847496 Query 42707 GGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTG 42766 || ||||| |||| || ||||||||||||||||| ||| ||||||| |||||||||| Sbjct 847497 CGTCGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCTGCCATCTTCTG 847556 Query 42767 GCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGG 42825 | | ||| || ||| || |||||||| || || ||||| ||||| |||||| | | | Sbjct 847557 GATGAAGAAGCGCGGTCTC-ATGCCCGGTCTGACATTCTCCAACGAGCTCATCTCCCGCG 847615 Query 42826 ACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAG-----GCA 42880 | ||||| |||| | |||||||| ||||| || ||| ||||||||| | || Sbjct 847616 ATGAGGGCATGCACACCGACTTTGCATGCCTACTCTTC---AGCCACCTCCGCCGGCGCC 847672 Query 42881 CAAGCCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGA 42940 || || ||| | | ||||| ||||| || ||||| || |||||| | Sbjct 847673 CACATCC-CGA--CACC--GTCCGCAAAATCATTACTGAGGCGGTACTGATCGAACAAAC 847727 Query 42941 GTTCCTCACGCAGTCGCTGCCCGTGTCCCTGGTCGGCATGAACCACGACCTCATGTGCAA 43000 ||||||||| | | || || || | || ||||||||||| |||| ||| | | Sbjct 847728 TTTCCTCACGGATGCCCTTCCTGTCGCGCTCATCGGCATGAACTCGAACCTAATGAACCA 847787 Query 43001 GTACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGC--CG----CCT 43054 |||||| ||| ||||||||| | || || || | | |||| || || | Sbjct 847788 GTACATAGAGTTCGTCGCCGATCGCCTTCT-TG-----TCGCTCTCGGCAACGAGAAGGT 847841 Query 43055 CTACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAA 43114 ||| ||| || |||||||||||| ||||| |||||| | |||| ||||| || Sbjct 847842 CTATAACGTCACGAACCCCTTCGACTTCATGGACCTCATCTCCCTTCAGGGAAAGACAAA 847901 Query 43115 CTTTTTCGAGAAGCGCGTCGCCGACTA 43141 ||| |||||||| || || | ||||| Sbjct 847902 CTTCTTCGAGAAACGAGTATCGGACTA 847928 >seq6 Length=1460661 Score = 138 bits (152), Expect = 2e-27 Identities = 308/459 (67%), Gaps = 10/459 (2%) Strand=Plus/Minus Query 244799 GCGTCCTTGTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTC 244858 || |||||||| | |||||| || ||||| ||||| | ||| ||| |||| | | | | Sbjct 1097014 GCATCCTTGTACAACATGAACGGGCCCCCAGTCTCAATCTGTGCGTCGAGAATGGCATAC 1096955 Query 244859 CAGAGGTCCCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTAC 244918 || || | | ||||||| ||| | || ||||| ||||| || || ||| Sbjct 1096954 CACAGCTTCTGGGCCTTGATGGTCTGCCTCGCGCGACCCTCGCGTTCGTAACGAGTATAC 1096895 Query 244919 AGGGCCTCGAACTCGGGGCCCCAGACCTCGTCTAGGCCGGGGCACGACGCC-GGGCACAT 244977 | |||||||| || || ||||| | ||| || | | | ||||| | Sbjct 1096894 AAAGCCTCGAAATCTTCGCTGTGCACCTCAGACATGCCAGG-CGCTTCATTAGGGCAGAA 1096836 Query 244978 GAGACTCCACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGC 245037 |||| ||| || ||| || || ||| | || |||||| || || | ||||||||||| Sbjct 1096835 GAGAGACCAGTCACCGTCGGACTCGACGCGCTTCATGAACAGATCTGAAATCCAGAGGGC 1096776 Query 245038 CTGGAAGAGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAA 245097 | ||| ||||| | | | | || ||| ||| |||||| | ||| || | || Sbjct 1096775 GTAGAAAAGGTCACGTGCGCGCACTTCCTCCTTGCCGTGGTTCTTGCGCAGGTCGAGGAA 1096716 Query 245098 GTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTT 245157 || ||||||||| ||||||||||||| ||||||| ||| | ||| ||||| |||||||| Sbjct 1096715 CTCGAAGACGTCGGCGTGCCAGGGCTCGATGTAGATAGCAAAGGCACCGGGGCGCTTGTT 1096656 Query 245158 GCCTCCCTGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTA 245213 || || ||||| | | | ||||| || | | | || || | || || | Sbjct 1096655 ACCGCCTTGGTCGA----CGTAGCGAGCAGTAGCATCGTAAGCACGGAGCATGGGGACGA 1096600 Query 245214 TGCCGTTAGAGTGGCCGTTGGTGCCCTTGATGTAGGCGC 245252 | ||||| |||| ||| ||||||||| |||||||| || Sbjct 1096599 TACCGTTCGAGTAGCCATTGGTGCCCGCGATGTAGGAGC 1096561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944338031380240