Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq14 158 3e-33 seq3 138 3e-27 >seq14 Length=1069518 Score = 158 bits (174), Expect = 3e-33 Identities = 175/232 (75%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | ||| || | |||| ||| ||| || ||||| || |||| Sbjct 1023521 CATG-CCACCACGGAGACGAAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGT 1023463 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||| ||||| || || || | || || || |||||||| || ||||| || | Sbjct 1023462 CGGAGAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAG 1023403 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 || || || || || ||||| || || || || ||||| || |||| |||||||| | Sbjct 1023402 GAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGACT 1023343 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || || ||||||||||| |||||||||||||||||||| |||||||| Sbjct 1023342 CGACCTCAAGAGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291 Score = 152 bits (168), Expect = 1e-31 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||||| || || || |||||||| ||||||| Sbjct 1023973 CCACCACGGAGACGCAGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAA 1023914 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || ||||||||||| ||||| ||| ||| Sbjct 1023913 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGG 1023854 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || || || || ||||| || || | ||| |||||| ||| Sbjct 1023853 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGACT 1023794 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| ||||| || |||| ||||||||||| || ||||| Sbjct 1023793 TCGAGCGTGATGGTCTTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747 Score = 149 bits (164), Expect = 1e-30 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | ||| || || |||| ||| || || || || || ||||| | | Sbjct 1023745 CCACCGCGGAGACGAAGCACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGAG 1023686 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || |||||||| |||||||| ||| | || Sbjct 1023685 AGTGTGCGACCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGA 1023626 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || ||||||||||| || || || ||||| || |||| || || || || Sbjct 1023625 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAACC 1023566 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| |||||||| ||||| || || |||||||| Sbjct 1023565 TCGAGTGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 1023519 Score = 149 bits (164), Expect = 1e-30 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| ||||| | ||| || || || | |||| || || ||||| || |||||| Sbjct 1024204 TGCCCACCACGGAGACGAAGGACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCG 1024145 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 || ||||| || || || | || || || |||||||| |||||||| || Sbjct 1024144 CTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGA 1024085 Query 288364 GGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 ||||| || || || |||||||| ||||| ||||| || || || | ||||| || || Sbjct 1024084 GGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGACTCG 1024025 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||||| ||||||||||| || |||| |||||| ||||| |||||||| Sbjct 1024024 ACTTCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAAATCTGCAT 1023975 >seq3 Length=1694370 Score = 138 bits (152), Expect = 3e-27 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| ||||| | ||| || || |||| ||| ||| || |||||||| || || | Sbjct 423495 TCCACCACGGAGACGAAGCACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGA 423554 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || ||||| || | || || || ||||||||||| | ||| || | || Sbjct 423555 CAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGG 423614 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| || || || |||||||| || ||||| ||||| || || | || || || || Sbjct 423615 GATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 423674 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTATGTT 288479 ||||| ||||| ||||| || || |||||||||||||| |||||||| |||| Sbjct 423675 CTCGAGTGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCATGCTGTT 423728 Score = 125 bits (138), Expect = 2e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || || || |||| ||| || || |||||||| ||||| | Sbjct 422987 CCGCCACGGAGACGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGAA 423046 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || || |||||||| || || || ||| Sbjct 423047 AGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGG 423106 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| || ||||||||||| || || ||||| || || | || || || || Sbjct 423107 ATGCCTTCCTTGTCCTGGATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACC 423166 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || |||||||||||||| || |||||||| Sbjct 423167 TCGAGGGTGATGGTCTTGCCTGTCAGAGTCTTGACAAAGATCTGCAT 423213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179652903682122