Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq3 123 3e-23
seq14 118 1e-21
>seq3
Length=1694370
Score = 123 bits (136), Expect = 3e-23
Identities = 144/192 (75%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || ||||||||||| | ||| || || |||| || |||||||| ||||||||
Sbjct 423532 TCCTTCTGGATATTGTAATCCGACAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 423591
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137
|| || | ||||||||| | || | || |||||||||| ||| || ||||| |||
Sbjct 423592 ATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGA-CGTT 423650
Query 42138 G-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | | |||||| || || || |||| |||||||| ||||| || || ||||| ||
Sbjct 423651 GTCGATCGTGTCCGAGGACTCGACCTCGAGTGTGATGGTCTTGCCAGTGAGAGTCTTGAC 423710
Query 42197 AAAGATTTGCAT 42208
||||| |||||
Sbjct 423711 GAAGATCTGCAT 423722
>seq14
Length=1069518
Score = 118 bits (130), Expect = 1e-21
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 41993 ACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTC 42052
||||| ||| | ||| | || |||||| || |||||||| || | || || || |
Sbjct 1023962 ACGCAGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACC 1023903
Query 42053 GTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTT 42112
||| || |||||||| || ||||| || || |||||||| |||| || | || ||||||
Sbjct 1023902 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTT 1023843
Query 42113 GTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGA 42171
|||| ||| | || | |||| | | | || || |||||| || |||| |||||
Sbjct 1023842 GTCC-TGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGACTTCGAGCGTGA 1023784
Query 42172 TGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|||| || ||||| | |||||| || |||||||||||
Sbjct 1023783 TGGTCTTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747
Score = 102 bits (112), Expect = 9e-17
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 42000 ACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCT 42059
||||| || | ||| ||||| || || ||||| || | || || || | || ||
Sbjct 1023499 ACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCA 1023440
Query 42060 AGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATG 42119
|||||||| |||||||| || || ||||||||||| | || | | |||||||||| ||
Sbjct 1023439 AGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC-TG 1023381
Query 42120 ATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTT 42178
| | || | |||| | | | ||||||||||| || || || | ||||| || ||
Sbjct 1023380 AATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATCGTCTT 1023321
Query 42179 GCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
||| || || ||||| || ||||| |||||
Sbjct 1023320 GCCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291
Score = 100 bits (110), Expect = 3e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 42006 TGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGC 42065
|||| ||| |||||| || || ||||| || |||||| || | || || ||||||
Sbjct 1024177 TGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGC 1024118
Query 42066 TTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTT 42125
|| |||||||| || || ||||||||||||| || | | |||||||||| ||| ||
Sbjct 1024117 TTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTC 1024058
Query 42126 TGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTT 42185
|| | | | | |||||||| || || || |||| ||||| || ||||| ||
Sbjct 1024057 GCCTTCACATTGTCGATGGTGTCGCTGGACTCGACTTCGAGAGTGATCGTCTTGCCAGTC 1023998
Query 42186 AGCGTCTTTACAAAGATTTGCAT 42208
| ||||| || || || |||||
Sbjct 1023997 AAAGTCTTCACGAAAATCTGCAT 1023975
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543212127774160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |