Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq14 114 1e-20 seq3 113 5e-20 seq6 87.8 2e-12 >seq14 Length=1069518 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| ||||| | | |||||| || |||| ||| || || || ||||||||||| || | Sbjct 1023746 ACCACCGCGGAGACGAAGCACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGA 1023687 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || ||||| ||||||| |||||||||||||| | ||||| |||||||| || || || Sbjct 1023686 GAGTGTGCGACCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGG 1023627 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || || || || || || || ||| || || | || || | || || Sbjct 1023626 AATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAAC 1023567 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | |||||||||||||| || || || || || ||||| Sbjct 1023566 CTCGAGTGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 1023519 Score = 111 bits (122), Expect = 2e-19 Identities = 154/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| ||||||| || || || || || || ||||| || | | |||||| |||| Sbjct 1023958 AGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCGTCC 1023899 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | || || |||||||| |||||||| || || || || || Sbjct 1023898 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCC 1023839 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCG--TCCACTTCTACAGTTACGG 64409 || || || ||| || || | |||| ||| || || ||||| | || | || Sbjct 1023838 TGAATCTTGGCCTTGACGTTATCAATGGTAT--CCGACGATTCGACTTCGAGCGTGATGG 1023781 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| || ||||| || || ||||| |||||||| Sbjct 1023780 TCTTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | ||| || || || || |||||||| || | ||||| | || Sbjct 1024187 AAGGACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATC 1024128 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||| || | || || ||||||||||||||||| || || || || || Sbjct 1024127 CTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTC 1024068 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| || | || || | || || ||||| | ||| | || Sbjct 1024067 CTGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGACTCGACTTCGAGAGTGATCGT 1024008 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| |||||||| || |||||||| ||||| Sbjct 1024007 CTTGCCAGTCAAAGTCTTCACGAAAATCTGCAT 1023975 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| || || |||||||| || | || |||||| | || ||||||||| Sbjct 1023493 TGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGC 1023434 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || | || || ||||||||||| |||||||| || || || || || || || Sbjct 1023433 TTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTG 1023374 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || || | || || | | || || || | ||| | |||||||||||| Sbjct 1023373 GCCTTGACGTTATCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATCGTCTTGCCGGTC 1023314 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | ||| || ||||| || ||||| Sbjct 1023313 AGAGTCTTGACGAAGATCTGCAT 1023291 >seq3 Length=1694370 Score = 113 bits (124), Expect = 5e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || |||| |||||| || || || || ||||| || | | ||||| |||| Sbjct 423002 AGCACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGACCGTCC 423061 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || ||||| |||||||||||||| || ||||| || || Sbjct 423062 TCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCC 423121 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || |||||| ||| || || | || || | || || || | || | |||| Sbjct 423122 TGGATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACCTCGAGGGTGATGGTC 423181 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| |||| ||| || || || || ||||| Sbjct 423182 TTGCCTGTCAGAGTCTTGACAAAGATCTGCAT 423213 Score = 100 bits (110), Expect = 3e-16 Identities = 152/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||| || |||| || ||||| || || || |||||||| | | ||| || |||| Sbjct 423510 AAGCACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGACAGGGTACGGCCGTC 423569 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 |||||||||||||| || | || |||| ||||||||| ||||| || || || || || Sbjct 423570 CTCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTC 423629 Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 || | | || ||||| || || | || || || || || || | || | || Sbjct 423630 CTGGA-TCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGTGTGATGG 423688 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||||| || | ||| || ||||| || ||||| Sbjct 423689 TCTTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 423722 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 |||||||| |||| || ||||| || ||||||||||| || | | ||||| |||| Sbjct 423229 AAGCACTAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGACCGTC 423288 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAAT 64338 ||||||||||||||||| | || |||| ||||||||| ||||| || Sbjct 423289 CTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTCAGGAGGGAT 423336 >seq6 Length=1460661 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 155226 GTTTCGTACATTCCTTTGATGCTGTCTTCTTTCAACGTCAACAAGAAACACGAAGATAAT 155285 || || || || || | ||| ||||| || |||| | | || |||||| ||||| | Sbjct 1096439 GTATCATAGATGCCCTCGATACTGTCGTCCTTCATGGCAACCAGGAAACAGGAAGAGAGC 1096380 Query 155286 TGAGGTTGAGGGCAGCCGGCCGCAAATAATGTAGGACTAGCGTGTGTAAACATTTTGTTG 155345 ||||| || || |||||| || | || || ||||||||||| || | | Sbjct 1096379 TGAGGATGGGGCGTGCCGGCATTGAAGAGCGTCGGGCTAGCGTGTGTGAAGTACCGCTCG 1096320 Query 155346 GCGGTTAAGTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCC 155405 | | | | |||| ||| | | ||| |||||| || || ||||||||||| || || Sbjct 1096319 GACATCAGGGTGTAGGTTGCTAATGCGCGGTCAATATCTCGGCCGTGTATACCAATGGCT 1096260 Query 155406 ACGCGCATCAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGTTGATGCGC 155456 || ||||||||||| || || ||||| ||||| ||||||||| ||| Sbjct 1096259 ACACGCATCAGCATCTGCTGGGGTCGCTCGGCAACTTTGCCGTTGATCCGC 1096209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644181689560