Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq6 163 3e-35 >seq6 Length=1460661 Score = 163 bits (180), Expect = 3e-35 Identities = 314/457 (69%), Gaps = 16/457 (4%) Strand=Plus/Plus Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128 ||||||||| || ||||||||| ||| ||||| ||||||| |||||||| | ||| Sbjct 1096563 TCCTACATCGCGGGCACCAATGGCTACTCGAACGGTATCGTCCCCATGCTCCGTG-CTT- 1096620 Query 94129 AACAACGCG---GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCG 94185 || | || || |||||||| ||||| || ||| | | | ||| | || || Sbjct 1096621 -ACGATGCTACTGCTCGCTACGTCGACCAAGGCGGTAACAAGCGCCCCGGTGCCTTTGCT 1096679 Query 94186 GTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCAC 94245 |||| |||||||||||||||| ||||| | ||| |||||||||| ||||||||| Sbjct 1096680 ATCTACATCGAGCCCTGGCACGCCGACGTCTTCGAGTTCCTCGACCTGCGCAAGAACCAC 1096739 Query 94246 GGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTT 94305 ||||| || | | | || | ||||| |||||||| |||||| | |||| || || Sbjct 1096740 GGCAAGGAGGAAGTGCGCGCACGTGACCTTTTCTACGCCCTCTGGATTTCAGATCTGTTC 1096799 Query 94306 ATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGA 94365 ||||| ||||||||| || | |||| ||| || || || |||||| || || Sbjct 1096800 ATGAAGCGCGTCGAGTCCGACGGTGACTGGTCTCTCTTCTGCCCTAATGAAGCGCCTGGC 1096859 Query 94366 CTGTCCGACGTTTGTGGATCGCG----TTTTGAAGACTTGTATGCTCGTTACGAATCGC- 94420 |||| || ||| | ||| ||| || | |||||| ||||||||||| ||| Sbjct 1096860 ATGTCTGA----GGTGCACAGCGAAGATTTCGAGGCTTTGTATACTCGTTACGAA-CGCG 1096914 Query 94421 AGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTAC 94480 |||| || ||| || || | || |||||||||| || || | |||| || Sbjct 1096915 AGGGTCGCGCGAGGCAGACCATCAAGGCCCAGAAGCTGTGGTATGCCATTCTCGACGCAC 1096974 Query 94481 AGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGA 94517 || | ||||| || || | ||| |||| |||||| Sbjct 1096975 AGATTGAGACTGGGGGCCCGTTCATGTTGTACAAGGA 1097011 Score = 118 bits (130), Expect = 1e-21 Identities = 326/496 (66%), Gaps = 16/496 (3%) Strand=Plus/Plus Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163 ||||| ||||| || |||||||| | |||||||| || |||||||||| ||||| || Sbjct 1097632 GCCCCTATGCCTACCGCCTCCACTTCCCAGATCCTGGGGAACAACGAGTGCTTCGAGCCG 1097691 Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223 | || || | | ||| | || || |||||||| || |||| || || | | Sbjct 1097692 TATACATCTATGATCTACGCGCGTCGTGTACTCGCCGGCGAGTTCCAGGTTGTCTGCCCG 1097751 Query 95224 CACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGGT-CAAGA----AC 95277 || || || || || | || ||| || | ||| ||| || | | || | Sbjct 1097752 TGGCTTCTTCGCGATCTTGTCGA-TCTCGGCCTATGGAACGACCAGATGCGGGATATGAT 1097810 Query 95278 CAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAG 95337 || | ||| | || || || ||||||||||||| ||| ||||| ||||||| Sbjct 1097811 CATC-GCTTCCGGC----GGGTCGATCCAGAACATCCCCGGAATCCCGGACAACATCAAA 1097865 Query 95338 GCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCC 95397 ||| ||||||||||||| ||||||||| | ||| ||| ||||||| ||| || | | Sbjct 1097866 GCGATCTACAAGACCGTCTGGGAGATCTCACAGAAGAAGATCCTCGACCTCGCCGCGGAC 1097925 Query 95398 CGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNNNATGGCC-GAGCCC-AGTC 95455 || || | |||||||||||||| || || |||||| | || Sbjct 1097926 CGGGGTGCGTTCATCTGCCAGAG--TCAGAGCTTGAACGTCCATCTCCAGAGCCCTACTC 1097983 Query 95456 GCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGGTCTCAAGACCGGTATGT 95515 ||| | | ||||||||| |||||||| |||| ||||| |||||||| || |||| Sbjct 1097984 TCGGCCAGCTCACGTCCATGCATTTCTACGGCTGGAAGAAGGGGCTCAAGACGGGCATGT 1098043 Query 95516 ATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACAGTTCGCCCTAGAAAAGTCGGTCA 95575 | || | || || | || || | |||| |||||| |||| || ||||||| Sbjct 1098044 ACTACCTTCGTACGCGCCCTGCTGCTCAGGCCATCCAGTTCACCCTGGACGCCTCGGTCA 1098103 Query 95576 AGAACCACGAGGAGGA 95591 || || | | |||| Sbjct 1098104 TCAAGCAGGCGAAGGA 1098119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722587780040