Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq6 163 3e-35
>seq6
Length=1460661
Score = 163 bits (180), Expect = 3e-35
Identities = 314/457 (69%), Gaps = 16/457 (4%)
Strand=Plus/Plus
Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTC 94128
||||||||| || ||||||||| ||| ||||| ||||||| |||||||| | |||
Sbjct 1096563 TCCTACATCGCGGGCACCAATGGCTACTCGAACGGTATCGTCCCCATGCTCCGTG-CTT- 1096620
Query 94129 AACAACGCG---GCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCG 94185
|| | || || |||||||| ||||| || ||| | | | ||| | || ||
Sbjct 1096621 -ACGATGCTACTGCTCGCTACGTCGACCAAGGCGGTAACAAGCGCCCCGGTGCCTTTGCT 1096679
Query 94186 GTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCAC 94245
|||| |||||||||||||||| ||||| | ||| |||||||||| |||||||||
Sbjct 1096680 ATCTACATCGAGCCCTGGCACGCCGACGTCTTCGAGTTCCTCGACCTGCGCAAGAACCAC 1096739
Query 94246 GGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTT 94305
||||| || | | | || | ||||| |||||||| |||||| | |||| || ||
Sbjct 1096740 GGCAAGGAGGAAGTGCGCGCACGTGACCTTTTCTACGCCCTCTGGATTTCAGATCTGTTC 1096799
Query 94306 ATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGA 94365
||||| ||||||||| || | |||| ||| || || || |||||| || ||
Sbjct 1096800 ATGAAGCGCGTCGAGTCCGACGGTGACTGGTCTCTCTTCTGCCCTAATGAAGCGCCTGGC 1096859
Query 94366 CTGTCCGACGTTTGTGGATCGCG----TTTTGAAGACTTGTATGCTCGTTACGAATCGC- 94420
|||| || ||| | ||| ||| || | |||||| ||||||||||| |||
Sbjct 1096860 ATGTCTGA----GGTGCACAGCGAAGATTTCGAGGCTTTGTATACTCGTTACGAA-CGCG 1096914
Query 94421 AGGGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTAC 94480
|||| || ||| || || | || |||||||||| || || | |||| ||
Sbjct 1096915 AGGGTCGCGCGAGGCAGACCATCAAGGCCCAGAAGCTGTGGTATGCCATTCTCGACGCAC 1096974
Query 94481 AGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGA 94517
|| | ||||| || || | ||| |||| ||||||
Sbjct 1096975 AGATTGAGACTGGGGGCCCGTTCATGTTGTACAAGGA 1097011
Score = 118 bits (130), Expect = 1e-21
Identities = 326/496 (66%), Gaps = 16/496 (3%)
Strand=Plus/Plus
Query 95104 GCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCC 95163
||||| ||||| || |||||||| | |||||||| || |||||||||| ||||| ||
Sbjct 1097632 GCCCCTATGCCTACCGCCTCCACTTCCCAGATCCTGGGGAACAACGAGTGCTTCGAGCCG 1097691
Query 95164 TTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAG 95223
| || || | | ||| | || || |||||||| || |||| || || | |
Sbjct 1097692 TATACATCTATGATCTACGCGCGTCGTGTACTCGCCGGCGAGTTCCAGGTTGTCTGCCCG 1097751
Query 95224 CACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTGACAAGGT-CAAGA----AC 95277
|| || || || || | || ||| || | ||| ||| || | | || |
Sbjct 1097752 TGGCTTCTTCGCGATCTTGTCGA-TCTCGGCCTATGGAACGACCAGATGCGGGATATGAT 1097810
Query 95278 CAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATACCGGAGGACATCAAG 95337
|| | ||| | || || || ||||||||||||| ||| ||||| |||||||
Sbjct 1097811 CATC-GCTTCCGGC----GGGTCGATCCAGAACATCCCCGGAATCCCGGACAACATCAAA 1097865
Query 95338 GCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACTCGACCACGCGGCCGCC 95397
||| ||||||||||||| ||||||||| | ||| ||| ||||||| ||| || | |
Sbjct 1097866 GCGATCTACAAGACCGTCTGGGAGATCTCACAGAAGAAGATCCTCGACCTCGCCGCGGAC 1097925
Query 95398 CGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNNNNNNNNATGGCC-GAGCCC-AGTC 95455
|| || | |||||||||||||| || || |||||| | ||
Sbjct 1097926 CGGGGTGCGTTCATCTGCCAGAG--TCAGAGCTTGAACGTCCATCTCCAGAGCCCTACTC 1097983
Query 95456 GCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAGAAAGGGTCTCAAGACCGGTATGT 95515
||| | | ||||||||| |||||||| |||| ||||| |||||||| || ||||
Sbjct 1097984 TCGGCCAGCTCACGTCCATGCATTTCTACGGCTGGAAGAAGGGGCTCAAGACGGGCATGT 1098043
Query 95516 ATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACAGTTCGCCCTAGAAAAGTCGGTCA 95575
| || | || || | || || | |||| |||||| |||| || |||||||
Sbjct 1098044 ACTACCTTCGTACGCGCCCTGCTGCTCAGGCCATCCAGTTCACCCTGGACGCCTCGGTCA 1098103
Query 95576 AGAACCACGAGGAGGA 95591
|| || | | ||||
Sbjct 1098104 TCAAGCAGGCGAAGGA 1098119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494722587780040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |