Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq14 138 1e-27
seq3 114 1e-20
>seq14
Length=1069518
Score = 138 bits (152), Expect = 1e-27
Identities = 171/233 (73%), Gaps = 1/233 (0%)
Strand=Plus/Minus
Query 126881 ACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAA 126940
||||| ||||| || | || | || | || | ||| ||||| || || || |||||
Sbjct 1024206 ACTGC-CCACCACGGAGACGAAGGACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAG 1024148
Query 126941 TCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCG 127000
|||| || ||||| ||| || ||||| || |||||| |||| | |||||||| |||
Sbjct 1024147 TCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCG 1024088
Query 127001 GGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTC 127060
||||| || |||||||||||| ||| ||| ||| | | |||| |||||| | |
Sbjct 1024087 GGAGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGAC 1024028
Query 127061 TCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||||||||| || | ||| ||||| |||| ||| || || |||||||||||
Sbjct 1024027 TCGACTTCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAAATCTGCAT 1023975
Score = 118 bits (130), Expect = 1e-21
Identities = 163/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
|||||||| | || | ||| | || | ||| ||||| || ||||| ||||| ||
Sbjct 1023745 CCACCGCGGAGACGAAGCACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGAG 1023686
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| || || ||| |||| | ||||||||||| || ||
Sbjct 1023685 AGTGTGCGACCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGA 1023626
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||| ||| ||| || ||||| | |||| ||||||| ||| ||
Sbjct 1023625 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAACC 1023566
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
|||| || | || ||||||||||| || || ||||| |||||||||
Sbjct 1023565 TCGAGTGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATG 1023518
Score = 116 bits (128), Expect = 4e-21
Identities = 162/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | |||| ||| | ||| | |||||||| || || |||||||| |||
Sbjct 1023973 CCACCACGGAGACGCAGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAA 1023914
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| |||||| || || ||||| || || ||| |||||| |||||||||||||||||
Sbjct 1023913 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGG 1023854
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
||||||||||||||| || || ||||| | || | ||| |||| ||||||
Sbjct 1023853 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGACT 1023794
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|||| || | || || || |||| || || || || || |||||
Sbjct 1023793 TCGAGCGTGATGGTCTTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| || | || | ||||| || | || || || || || || ||||| |||
Sbjct 1023517 CCACCACGGAGACGAAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 1023458
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| ||||| ||| || ||||| || |||||| |||| | |||||||| || |||||
Sbjct 1023457 AGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 1023398
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066
|| |||||||||||| || || ||||| | |||| ||||| | ||||||
Sbjct 1023397 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGACTCGACC 1023338
Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| | || | ||| |||||||||||||| || || || ||||||||
Sbjct 1023337 TCAAGAGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291
>seq3
Length=1694370
Score = 114 bits (126), Expect = 1e-20
Identities = 165/230 (72%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945
|||||| || | || | ||||| || | || || || || || |||||||||||
Sbjct 423495 TCCACCACGGAGACGAAGCACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGA 423554
Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005
|| || || || || ||||| || |||||| |||||| | |||||| || |||||
Sbjct 423555 CAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGG 423614
Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGA 127064
||||||||||||||| ||| || |||| |||| |||| ||||||| |||||
Sbjct 423615 GATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTG-TCGATCGTGTCCGAGGACTCGA 423673
Query 127065 CTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114
| |||| || | || ||||| || ||||| || || || |||||||||
Sbjct 423674 CCTCGAGTGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCATG 423723
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475500211567760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |