Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3 102 7e-17 seq14 86.0 6e-12 >seq3 Length=1694370 Score = 102 bits (112), Expect = 7e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | ||| || || ||||| || ||||| |||||||| || || Sbjct 422987 CCGCCACGGAGACGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGAA 423046 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || | || || | || || || || | |||| ||||||||||| || || Sbjct 423047 AGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGG 423106 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 |||||||| || || || |||||| |||| || | || | |||||| || |||||||| Sbjct 423107 ATGCCTTCCTTGTCCTGGATTTTTGCCTTGA-CGTTGTCGATGGTGTCCGATGACTCGAC 423165 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || | || ||||| || ||||| || ||||| || ||||| Sbjct 423166 CTCGAGGGTGATGGTCTTGCCTGTCAGAGTCTTGACAAAGATCTGCAT 423213 >seq14 Length=1069518 Score = 86.0 bits (94), Expect = 6e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | || ||| ||||| || || || ||||| |||||||| || ||| Sbjct 1023976 ATACCACCACGGAGACGCAGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCG 1023917 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | || || | || || || ||| | |||| || ||||| || || Sbjct 1023916 GAAAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGA 1023857 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 || ||||| || || || ||||| || |||| || | || | ||| || || || || Sbjct 1023856 GGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGA-CGTTATCAATGGTATCCGACGATTC 1023798 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||||| || | || || || || | || || || || |||||||| Sbjct 1023797 GACTTCGAGCGTGATGGTCTTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| | | || || |||||||| || ||||| ||||| || || ||||| Sbjct 1024201 CCACCACGGAGACGAAGGACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTC 1024142 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | || ||| || | || || || ||| | || | || |||||||| || || Sbjct 1024141 AGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGG 1024082 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || || || || || || || || || | || | ||||||| ||||||||| Sbjct 1024081 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGACTCGACT 1024022 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| | ||| ||||| || | ||| || || ||||| ||||| Sbjct 1024021 TCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAAATCTGCAT 1023975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002640646040