Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq14 138 3e-27
seq3 120 7e-22
seq7 93.3 1e-13
>seq14
Length=1069518
Score = 138 bits (152), Expect = 3e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||||||||| || || |||||||| |||| ||||||||| || ||| | |||||
Sbjct 1024186 AGGACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 1024127
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| |||||||||||||| ||| || || || |||
Sbjct 1024126 TCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 1024067
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| |||||| |||| |||||| | | || || || | |||||||||
Sbjct 1024066 TGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGACTCGACTTCGAGAGTGATCGTC 1024007
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || | ||| ||||| ||||| ||
Sbjct 1024006 TTGCCAGTCAAAGTCTTCACGAAAATCTG 1023978
Score = 129 bits (142), Expect = 1e-24
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| |||||||| || || |||||||| || | ||||||||| | | || | || |||
Sbjct 1023730 AGCACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGACCGTCT 1023671
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
||||||||||| ||||||||||||||||||||||| || || ||| || || |||
Sbjct 1023670 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCC 1023611
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| ||||| ||| ||| |||| ||||| | || || || || | ||||| |||
Sbjct 1023610 TGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAACCTCGAGTGTGATGGTC 1023551
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || |||||||| || ||
Sbjct 1023550 TTGCCGGTCAGGGTCTTCACAAAGATCTG 1023522
Score = 111 bits (122), Expect = 4e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || | ||| || || || ||||| |||| ||||||||| | | || | |||||
Sbjct 1023502 AGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1023443
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || |||||||| || ||||||||||| ||| ||| || || |||
Sbjct 1023442 TCAAGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 1023383
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|||||||| ||| ||| |||| ||||| | | || || || | |||||||||
Sbjct 1023382 TGAATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATCGTC 1023323
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || ||||| || || || || ||
Sbjct 1023322 TTGCCGGTCAGAGTCTTGACGAAGATCTG 1023294
Score = 105 bits (116), Expect = 2e-17
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
|| || | ||| || || || || || |||||||| |||| |||||||| | | ||
Sbjct 1023967 CGGAGACGCAGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTG 1023908
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528
| || || || |||||||| ||||||||||| || |||||||| || ||| || ||
Sbjct 1023907 CGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGGATGCCC 1023848
Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588
|| ||||||||||| ||| ||| || | ||| || | | ||| || || | |
Sbjct 1023847 TCCTTGTCCTGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGACTTCGAGC 1023788
Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||||| ||||| ||||| | || || || || |||||
Sbjct 1023787 GTGATGGTCTTTCCCGTCAACGTCTTGACGAAGATTTG 1023750
Score = 95.1 bits (104), Expect = 3e-14
Identities = 87/110 (79%), Gaps = 0/110 (0%)
Strand=Plus/Minus
Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468
||||| | ||||| |||||||| ||||||||||| |||| |||||| || | || ||
Sbjct 1023283 CGAAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGTG 1023224
Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
| ||||| || ||||| || || |||||||| || ||||||||||| ||
Sbjct 1023223 CGGCCATCCTCAAGCTGTTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGG 1023174
>seq3
Length=1694370
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
|| || ||||| || ||||||||||| |||| |||||||||| | ||| | || ||
Sbjct 423002 AGCACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGACCGTCC 423061
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537
|| |||||||| || || ||||| || || |||||||| ||| || ||||| |||
Sbjct 423062 TCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCC 423121
Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597
|| || ||| ||| ||| |||| |||||| | || || || || | ||||| |||
Sbjct 423122 TGGATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACCTCGAGGGTGATGGTC 423181
Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || ||||| || ||||| || ||
Sbjct 423182 TTGCCTGTCAGAGTCTTGACAAAGATCTG 423210
>seq7
Length=1357966
Score = 93.3 bits (102), Expect = 1e-13
Identities = 81/101 (80%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477
||||| |||||||| || || |||||||||| ||||||||| | | || | || |||
Sbjct 1033433 AGGACGAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGAGAGTGTGCGGCCGTCT 1033374
Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGG 199518
|| |||||||| ||||||||||| || || |||||||| ||
Sbjct 1033373 TCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGG 1033333
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178920104611633
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |