Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq14 168 8e-37
seq3 140 4e-28
seq7 107 2e-18
>seq14
Length=1069518
Score = 168 bits (186), Expect = 8e-37
Identities = 167/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||||| ||| ||||| | ||| |||||| ||||||||||||||||| || ||||| |
Sbjct 1023962 ACGCAGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACC 1023903
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| |||||||||||||||||||| |||| ||||||||| |||| || | || ||||||
Sbjct 1023902 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTT 1023843
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| ||||| ||||| | | | || || |||||| || || | ||||||
Sbjct 1023842 GTCCTGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGACTTCGAGCGTGAT 1023783
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| || ||||||| ||| || || |||||||||||
Sbjct 1023782 GGTCTTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747
Score = 123 bits (136), Expect = 3e-23
Identities = 142/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| ||||||||||| || ||||| | || || |||||||| || |||||
Sbjct 1023481 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCGAAG 1023422
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | |||||||||||| | || | | |||||||||| ||||| ||||| |
Sbjct 1023421 ATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTA 1023362
Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582
| | ||||||||||| || || || | ||||| || ||||| ||||| || || ||
Sbjct 1023361 TCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATCGTCTTGCCGGTCAGAGTCTTGACG 1023302
Query 46583 AAGATTTGCAT 46593
||||| |||||
Sbjct 1023301 AAGATCTGCAT 1023291
Score = 122 bits (134), Expect = 1e-22
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||| |||||||| | || |||||||||||||| |||||
Sbjct 1024166 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 1024107
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | ||||||||||||| || | | |||||||||| ||||||| ||| | |
Sbjct 1024106 GATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATT 1024047
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | |||||||| || || || || | ||||| || ||||| |||| || || ||
Sbjct 1024046 GTCGATGGTGTCGCTGGACTCGACTTCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCAC 1023987
Query 46582 AAAGATTTGCAT 46593
|| || |||||
Sbjct 1023986 GAAAATCTGCAT 1023975
Score = 116 bits (128), Expect = 4e-21
Identities = 141/192 (73%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| || || |||||||| || || ||||| |||| || |||||||||||||||||
Sbjct 1023710 CTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGACCGTCTTCCAGCTGCTTGCCGGCGAA 1023651
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|| | |||||||| || | || | || |||||| ||| |||||| ||||| |
Sbjct 1023650 GATGAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTT 1023591
Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | ||||| || || || || | |||||||| ||||| ||||| || || ||
Sbjct 1023590 ATCGATAGTGTCCGATGACTCAACCTCGAGTGTGATGGTCTTGCCGGTCAGGGTCTTCAC 1023531
Query 46582 AAAGATTTGCAT 46593
|||||| |||||
Sbjct 1023530 AAAGATCTGCAT 1023519
>seq3
Length=1694370
Score = 140 bits (154), Expect = 4e-28
Identities = 171/231 (74%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 46364 TTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCG 46423
||||| || | | ||| | |||||| || | || |||||| ||||||||||||||
Sbjct 422984 TTGCCGCCACGGAGACGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCA 423043
Query 46424 GATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCC 46483
|| |||||||| |||| |||||||||||||| || || |||| || ||||||||||
Sbjct 423044 GAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGA 423103
Query 46484 GGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTC 46542
|| | || ||||||||| ||| || ||||| ||| | | | ||||| || ||
Sbjct 423104 GGGATGCCTTCCTTGTCCTGGATTTTTGCCTTGA-CGTTGTCGATGGTGTCCGATGACTC 423162
Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| || | |||||||| ||||| ||||| || || |||||||| |||||
Sbjct 423163 GACCTCGAGGGTGATGGTCTTGCCTGTCAGAGTCTTGACAAAGATCTGCAT 423213
Score = 114 bits (126), Expect = 1e-20
Identities = 142/192 (74%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||||||||| || || || || || |||| || ||||||||||| |||||
Sbjct 423532 TCCTTCTGGATATTGTAATCCGACAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 423591
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|||| | ||||||||| | || | || |||||||||| |||||| |||| |||
Sbjct 423592 ATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGA-CGTT 423650
Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| | | |||||| || || || || | |||||||| ||||| || || || || ||
Sbjct 423651 GTCGATCGTGTCCGAGGACTCGACCTCGAGTGTGATGGTCTTGCCAGTGAGAGTCTTGAC 423710
Query 46582 AAAGATTTGCAT 46593
||||| |||||
Sbjct 423711 GAAGATCTGCAT 423722
>seq7
Length=1357966
Score = 107 bits (118), Expect = 2e-18
Identities = 77/89 (87%), Gaps = 0/89 (0%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||||||||| ||||||||||| || ||||| |||| ||||||||||||||||||||
Sbjct 1033412 TCCTTTTGGATGTTGTAGTCGGAGAGTGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAG 1033353
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCT 46491
|||| ||| |||||||||| ||| | |||
Sbjct 1033352 ATCAGGCGTTGCTGGTCGGGCGGGATGCT 1033324
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565237700517480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |