Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq14 168 8e-37 seq3 140 4e-28 seq7 107 2e-18 >seq14 Length=1069518 Score = 168 bits (186), Expect = 8e-37 Identities = 167/216 (77%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||| ||||| | ||| |||||| ||||||||||||||||| || ||||| | Sbjct 1023962 ACGCAGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACC 1023903 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| |||||||||||||||||||| |||| ||||||||| |||| || | || |||||| Sbjct 1023902 GTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTT 1023843 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| ||||| ||||| | | | || || |||||| || || | |||||| Sbjct 1023842 GTCCTGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGACTTCGAGCGTGAT 1023783 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || ||||||| ||| || || ||||||||||| Sbjct 1023782 GGTCTTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747 Score = 123 bits (136), Expect = 3e-23 Identities = 142/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| ||||||||||| || ||||| | || || |||||||| || ||||| Sbjct 1023481 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCGAAG 1023422 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | |||||||||||| | || | | |||||||||| ||||| ||||| | Sbjct 1023421 ATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTA 1023362 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | ||||||||||| || || || | ||||| || ||||| ||||| || || || Sbjct 1023361 TCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATCGTCTTGCCGGTCAGAGTCTTGACG 1023302 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 1023301 AAGATCTGCAT 1023291 Score = 122 bits (134), Expect = 1e-22 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||| |||||||| | || |||||||||||||| ||||| Sbjct 1024166 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAA 1024107 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | ||||||||||||| || | | |||||||||| ||||||| ||| | | Sbjct 1024106 GATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGCCTTCACATT 1024047 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | |||||||| || || || || | ||||| || ||||| |||| || || || Sbjct 1024046 GTCGATGGTGTCGCTGGACTCGACTTCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCAC 1023987 Query 46582 AAAGATTTGCAT 46593 || || ||||| Sbjct 1023986 GAAAATCTGCAT 1023975 Score = 116 bits (128), Expect = 4e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || |||||||| || || ||||| |||| || ||||||||||||||||| Sbjct 1023710 CTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGACCGTCTTCCAGCTGCTTGCCGGCGAA 1023651 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||| || | || | || |||||| ||| |||||| ||||| | Sbjct 1023650 GATGAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTT 1023591 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || || | |||||||| ||||| ||||| || || || Sbjct 1023590 ATCGATAGTGTCCGATGACTCAACCTCGAGTGTGATGGTCTTGCCGGTCAGGGTCTTCAC 1023531 Query 46582 AAAGATTTGCAT 46593 |||||| ||||| Sbjct 1023530 AAAGATCTGCAT 1023519 >seq3 Length=1694370 Score = 140 bits (154), Expect = 4e-28 Identities = 171/231 (74%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 46364 TTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCG 46423 ||||| || | | ||| | |||||| || | || |||||| |||||||||||||| Sbjct 422984 TTGCCGCCACGGAGACGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCA 423043 Query 46424 GATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCC 46483 || |||||||| |||| |||||||||||||| || || |||| || |||||||||| Sbjct 423044 GAAAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGA 423103 Query 46484 GGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTC 46542 || | || ||||||||| ||| || ||||| ||| | | | ||||| || || Sbjct 423104 GGGATGCCTTCCTTGTCCTGGATTTTTGCCTTGA-CGTTGTCGATGGTGTCCGATGACTC 423162 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| ||||| ||||| || || |||||||| ||||| Sbjct 423163 GACCTCGAGGGTGATGGTCTTGCCTGTCAGAGTCTTGACAAAGATCTGCAT 423213 Score = 114 bits (126), Expect = 1e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||||||||| || || || || || |||| || ||||||||||| ||||| Sbjct 423532 TCCTTCTGGATATTGTAATCCGACAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAG 423591 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 |||| | ||||||||| | || | || |||||||||| |||||| |||| ||| Sbjct 423592 ATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTGA-CGTT 423650 Query 46523 G-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | |||||| || || || || | |||||||| ||||| || || || || || Sbjct 423651 GTCGATCGTGTCCGAGGACTCGACCTCGAGTGTGATGGTCTTGCCAGTGAGAGTCTTGAC 423710 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 423711 GAAGATCTGCAT 423722 >seq7 Length=1357966 Score = 107 bits (118), Expect = 2e-18 Identities = 77/89 (87%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||||||||| ||||||||||| || ||||| |||| |||||||||||||||||||| Sbjct 1033412 TCCTTTTGGATGTTGTAGTCGGAGAGTGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAG 1033353 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCT 46491 |||| ||| |||||||||| ||| | ||| Sbjct 1033352 ATCAGGCGTTGCTGGTCGGGCGGGATGCT 1033324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565237700517480