Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq1 149 6e-31
seq14 123 2e-23
seq7 86.0 6e-12
>seq1
Length=2114445
Score = 149 bits (164), Expect = 6e-31
Identities = 170/225 (76%), Gaps = 5/225 (2%)
Strand=Plus/Minus
Query 133219 ATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAAC-GCTC 133277
||||| || ||||| ||||| || ||||| | ||||||| || | || |||| ||||
Sbjct 847269 ATTTGGAAACCGTAGAAGCATCGGGCCTCAGCAGCCTGCACCTCATT-GCTAAACCGCTC 847211
Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337
|| ||||| |||||||||||||||||| || ||||| || || || ||||| |||
Sbjct 847210 AACGAGATTCTCGTTGACGATGCCGTCGGAAGCAGCGAAGAAAGCAAGGACGTGGGAGAT 847151
Query 133338 GAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394
|||||| |||||||| | ||||| || | |||||| | ||||||||||||||
Sbjct 847150 GAAATGACGCTCGTTATTGTTCAGACGGTTTTGCCAGTCATGGAGATCCTTGGACAGGTC 847091
Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|| |||||| | ||||| || || ||||| || || ||||||||
Sbjct 847090 CATCTCCTCTGCTGTCCAGAAGGATGCCTCTGCCTTCTTGTACAT 847046
Score = 143 bits (158), Expect = 3e-29
Identities = 346/513 (67%), Gaps = 12/513 (2%)
Strand=Plus/Minus
Query 132624 TTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTT 132683
|||||| || || || || ||||||| | ||| ||||| ||| || || ||||||||
Sbjct 847914 TTTCTCGAAGAAGTTTGTCTTTCCCTGAAGGGAGATGAGGTCCATGAAGTCGAAGGGGTT 847855
Query 132684 GGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAA 132740
| ||| ||| ||| | |||||| || |||| || || | ||||| |||||
Sbjct 847854 CGTGACGTTATAGACCTTCTCGTTGCCGAG-AG--CGACAAGAAGGCGATCGGCGACGAA 847798
Query 132741 CTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGC-ACCGGCAGCGCT 132798
||| ||||| || ||| | |||| | || | || | || ||| || || || ||
Sbjct 847797 CTCTATGTACTGGTTCATTAGGTTCG-AGTTCATGCCGATGAG-CGCGACAGGAAGGGCA 847740
Query 132799 TCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCC 132858
|| ||||| || ||| ||||| ||||| || || | ||||| | ||| | | |
Sbjct 847739 TCCGTGAGGAAAGTTTGTTCGATCAGTACCGCCTCAGTAATGATTTTGCGGACG-GTGTC 847681
Query 132859 GCGCTC-GGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCC 132917
| | | || || | | || |||| | | ||| ||||||||| |||| |||
Sbjct 847680 GGGATGTGGGCGCCGGCGGAGGTGGCTGAAGAGTAGGCATGCAAAGTCGGTGTGCATGCC 847621
Query 132918 CTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTT 132977
||| || | ||| ||||| |||||| ||| |||| ||||||||||| ||||| || ||
Sbjct 847620 CTCATCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCGGGCATGAGACCGCGCTTCTT 847561
Query 132978 GAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGC 133037
| ||| || ||||| ||||| ||| || ||||||| |||||| || || ||||| ||
Sbjct 847560 CATCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATGCCCTCCACAGCGGCGAAGGC 847501
Query 133038 CACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGC 133097
|| || || || | || || | ||| | |||||| || ||||| |||||
Sbjct 847500 GACGAGACGTTCAGCAAAGGTCGAACGCTTGTCCGAGATCCATTTCAATGCCCAGTCGGC 847441
Query 133098 CTTTTCTTTGACGCACGGCATCGTTTCGATGGC 133130
||| || | ||| || || || || |||||
Sbjct 847440 CTTGCGCTTAATGCATGGAATGGTATCAATGGC 847408
>seq14
Length=1069518
Score = 123 bits (136), Expect = 2e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | || ||||| || ||||| |||| |||||| ||| |
Sbjct 1023975 ATGCAGATTTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAAGTCGAGTCCAGC 1024034
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || | || |||| ||||| ||||| || || |||||||
Sbjct 1024035 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAG 1024094
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| || || | ||| ||||| ||||| || || | ||||| || | ||||||||||
Sbjct 1024095 CAGCGTCTTATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAAC 1024154
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||| ||||| | |||||||| | || || |||
Sbjct 1024155 ATCCAGAAGGAGTCCACGCTGCACCTTGTCCTTCGT 1024190
Score = 118 bits (130), Expect = 1e-21
Identities = 158/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || || ||||| || ||||| | || |||||| | | |
Sbjct 1023291 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACTCTTGAGGTCGAGTCGAGC 1023350
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || || | ||||| ||||| ||||| | |||||
Sbjct 1023351 GACACTATCGATAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCA 1023409
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | ||| || || ||||| || || | ||||||||| |||||||||
Sbjct 1023410 GCAGCGCCTTATCTTCGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAA 1023469
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|||||| |||||| | || || || ||||| || |||
Sbjct 1023470 CATCCAGAAGGAATCCACCCTTCACTTGGTTCTTCGT 1023506
Score = 114 bits (126), Expect = 1e-20
Identities = 157/217 (72%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || ||||| |||||||| |||| || ||| | |
Sbjct 1023519 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACACTCGAGGTTGAGTCATCG 1023578
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || | || |||| || || ||||| |||||| | || ||
Sbjct 1023579 GACACTATCGATAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCTGATCA 1023637
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| ||||| |||||||| |||| ||||| ||| ||||||||
Sbjct 1023638 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGTCGCACACTCTCGGACTACAA 1023697
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||| || ||||| | ||||| || | ||||| |||
Sbjct 1023698 CATTCAGAAGGAGTCAACGCTTCACCTTGTGCTTCGT 1023734
Score = 84.2 bits (92), Expect = 2e-11
Identities = 85/111 (77%), Gaps = 0/111 (0%)
Strand=Plus/Plus
Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408
|||||| ||||||| ||||| || || | ||| ||||||||||| || || | ||||||
Sbjct 1023168 ATTCCCCCCGACCAGCAGCGCCTGATCTTCGCTGGCAAACAGCTTGAGGATGGCCGCACC 1023227
Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
|| || ||||||||||| ||||| ||||||| || | || || |||
Sbjct 1023228 CTGTCGGATTACAACATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGT 1023278
>seq7
Length=1357966
Score = 86.0 bits (94), Expect = 6e-12
Identities = 93/122 (76%), Gaps = 1/122 (1%)
Strand=Plus/Plus
Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409
||||||| ||||| || || || || | ||| ||||| ||||| || |||| ||||| |
Sbjct 1033328 TCCCGCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACAC 1033387
Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCG 38469
|| |||||||||||||||||||||| | || || || | || || ||| || | || |
Sbjct 1033388 TCTCCGACTACAACATCCAAAAGGAATCCACCCTCCACCTCGTCCTCCGTCTGCGTGGAG 1033447
Query 38470 GC 38471
||
Sbjct 1033448 GC 1033449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172181036160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |