Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1 149 6e-31 seq14 123 2e-23 seq7 86.0 6e-12 >seq1 Length=2114445 Score = 149 bits (164), Expect = 6e-31 Identities = 170/225 (76%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 133219 ATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAAC-GCTC 133277 ||||| || ||||| ||||| || ||||| | ||||||| || | || |||| |||| Sbjct 847269 ATTTGGAAACCGTAGAAGCATCGGGCCTCAGCAGCCTGCACCTCATT-GCTAAACCGCTC 847211 Query 133278 GACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGAT 133337 || ||||| |||||||||||||||||| || ||||| || || || ||||| ||| Sbjct 847210 AACGAGATTCTCGTTGACGATGCCGTCGGAAGCAGCGAAGAAAGCAAGGACGTGGGAGAT 847151 Query 133338 GAAATGGCGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTC 133394 |||||| |||||||| | ||||| || | |||||| | |||||||||||||| Sbjct 847150 GAAATGACGCTCGTTATTGTTCAGACGGTTTTGCCAGTCATGGAGATCCTTGGACAGGTC 847091 Query 133395 CACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || |||||| | ||||| || || ||||| || || |||||||| Sbjct 847090 CATCTCCTCTGCTGTCCAGAAGGATGCCTCTGCCTTCTTGTACAT 847046 Score = 143 bits (158), Expect = 3e-29 Identities = 346/513 (67%), Gaps = 12/513 (2%) Strand=Plus/Minus Query 132624 TTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTT 132683 |||||| || || || || ||||||| | ||| ||||| ||| || || |||||||| Sbjct 847914 TTTCTCGAAGAAGTTTGTCTTTCCCTGAAGGGAGATGAGGTCCATGAAGTCGAAGGGGTT 847855 Query 132684 GGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAA 132740 | ||| ||| ||| | |||||| || |||| || || | ||||| ||||| Sbjct 847854 CGTGACGTTATAGACCTTCTCGTTGCCGAG-AG--CGACAAGAAGGCGATCGGCGACGAA 847798 Query 132741 CTCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGC-ACCGGCAGCGCT 132798 ||| ||||| || ||| | |||| | || | || | || ||| || || || || Sbjct 847797 CTCTATGTACTGGTTCATTAGGTTCG-AGTTCATGCCGATGAG-CGCGACAGGAAGGGCA 847740 Query 132799 TCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCC 132858 || ||||| || ||| ||||| ||||| || || | ||||| | ||| | | | Sbjct 847739 TCCGTGAGGAAAGTTTGTTCGATCAGTACCGCCTCAGTAATGATTTTGCGGACG-GTGTC 847681 Query 132859 GCGCTC-GGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCC 132917 | | | || || | | || |||| | | ||| ||||||||| |||| ||| Sbjct 847680 GGGATGTGGGCGCCGGCGGAGGTGGCTGAAGAGTAGGCATGCAAAGTCGGTGTGCATGCC 847621 Query 132918 CTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTT 132977 ||| || | ||| ||||| |||||| ||| |||| ||||||||||| ||||| || || Sbjct 847620 CTCATCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCGGGCATGAGACCGCGCTTCTT 847561 Query 132978 GAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGC 133037 | ||| || ||||| ||||| ||| || ||||||| |||||| || || ||||| || Sbjct 847560 CATCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATGCCCTCCACAGCGGCGAAGGC 847501 Query 133038 CACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGC 133097 || || || || | || || | ||| | |||||| || ||||| ||||| Sbjct 847500 GACGAGACGTTCAGCAAAGGTCGAACGCTTGTCCGAGATCCATTTCAATGCCCAGTCGGC 847441 Query 133098 CTTTTCTTTGACGCACGGCATCGTTTCGATGGC 133130 ||| || | ||| || || || || ||||| Sbjct 847440 CTTGCGCTTAATGCATGGAATGGTATCAATGGC 847408 >seq14 Length=1069518 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || | || ||||| || ||||| |||| |||||| ||| | Sbjct 1023975 ATGCAGATTTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAAGTCGAGTCCAGC 1024034 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || || ||||||| Sbjct 1024035 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAG 1024094 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||| ||||| || || | ||||| || | |||||||||| Sbjct 1024095 CAGCGTCTTATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAAC 1024154 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| ||||| | |||||||| | || || ||| Sbjct 1024155 ATCCAGAAGGAGTCCACGCTGCACCTTGTCCTTCGT 1024190 Score = 118 bits (130), Expect = 1e-21 Identities = 158/217 (73%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || ||||| || ||||| | || |||||| | | | Sbjct 1023291 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACTCTTGAGGTCGAGTCGAGC 1023350 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | ||||| ||||| ||||| | ||||| Sbjct 1023351 GACACTATCGATAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCA 1023409 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| || || ||||| || || | ||||||||| ||||||||| Sbjct 1023410 GCAGCGCCTTATCTTCGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAA 1023469 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| |||||| | || || || ||||| || ||| Sbjct 1023470 CATCCAGAAGGAATCCACCCTTCACTTGGTTCTTCGT 1023506 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || ||||| |||||||| |||| || ||| | | Sbjct 1023519 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACACTCGAGGTTGAGTCATCG 1023578 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| || || ||||| |||||| | || || Sbjct 1023579 GACACTATCGATAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCTGATCA 1023637 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | ||| ||||| |||||||| |||| ||||| ||| |||||||| Sbjct 1023638 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGTCGCACACTCTCGGACTACAA 1023697 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| | ||||| || | ||||| ||| Sbjct 1023698 CATTCAGAAGGAGTCAACGCTTCACCTTGTGCTTCGT 1023734 Score = 84.2 bits (92), Expect = 2e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 |||||| ||||||| ||||| || || | ||| ||||||||||| || || | |||||| Sbjct 1023168 ATTCCCCCCGACCAGCAGCGCCTGATCTTCGCTGGCAAACAGCTTGAGGATGGCCGCACC 1023227 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || || ||||||||||| ||||| ||||||| || | || || ||| Sbjct 1023228 CTGTCGGATTACAACATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGT 1023278 >seq7 Length=1357966 Score = 86.0 bits (94), Expect = 6e-12 Identities = 93/122 (76%), Gaps = 1/122 (1%) Strand=Plus/Plus Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409 ||||||| ||||| || || || || | ||| ||||| ||||| || |||| ||||| | Sbjct 1033328 TCCCGCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACAC 1033387 Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCG 38469 || |||||||||||||||||||||| | || || || | || || ||| || | || | Sbjct 1033388 TCTCCGACTACAACATCCAAAAGGAATCCACCCTCCACCTCGTCCTCCGTCTGCGTGGAG 1033447 Query 38470 GC 38471 || Sbjct 1033448 GC 1033449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172181036160