Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq1 136 5e-27
seq6 105 8e-18
seq9 98.7 1e-15
>seq1
Length=2114445
Score = 136 bits (150), Expect = 5e-27
Identities = 204/285 (72%), Gaps = 11/285 (4%)
Strand=Plus/Minus
Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573
|| ||||| || ||||||||||| || ||| || || |||||||| || | |||
Sbjct 847622 CCCTCATCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCGGGCATGAGACCGCGCTTC 847563
Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633
|| | ||| ||||||||| || || || |||||||||||||||||| ||||||
Sbjct 847562 TTCATCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATGCCCTCCACAGCGGCGAAG 847503
Query 119634 GCGAATAGACGCTCAGCAAAAGGTCG-AGACTTGTC---GAACCACTTGAGAGCCCAGTT 119689
|||| ||||| ||||| |||||||| | |||||| || ||| || | |||||||
Sbjct 847502 GCGACGAGACGTTCAGC-AAAGGTCGAACGCTTGTCCGAGATCCATTTCAATGCCCAGTC 847444
Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG---TTGCTTCTTTTC 119746
|||||| |||| ||||| || | || | ||||| ||||| || || || |||
Sbjct 847443 GGCCTTGCGCTTAATGCATGGAATGGTATCAATGGCATCGAAGAGATATTCACGCTGTTC 847384
Query 119747 AGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTC 119791
| ||||||| || ||| | ||||| || |||||| |||||
Sbjct 847383 GG---CATCCTTGATGTATGTGTCAATCAGGAGAGAGTATGTCTC 847342
>seq6
Length=1460661
Score = 105 bits (116), Expect = 8e-18
Identities = 185/267 (69%), Gaps = 2/267 (1%)
Strand=Plus/Minus
Query 110860 TTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCA 110919
||||| || || | |||||| ||||| ||||||||||| || ||| ||| |||
Sbjct 1096511 TTGGCGCGGATATTGTGGATGTGCATTCCAATACCACCAGCGGTCTTGGAAATCATTGCG 1096452
Query 110920 CAC-TCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAA 110978
|| ||| |||| ||| |||| || || || || || |||| |||||| || ||
Sbjct 1096451 CATGTCT-TGAGGGTATCATAGATGCCCTCGATACTGTCGTCCTTCATGGCAACCAGGAA 1096393
Query 110979 GCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAAT 111038
|| ||||| | ||||||| | ||||| || ||||||||||| || || | || || |
Sbjct 1096392 ACAGGAAGAGAGCTGAGGATGGGGCGTGCCGGCATTGAAGAGCGTCGGGCTAGCGTGTGT 1096333
Query 111039 GAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTG 111098
||| | | ||||||| | |||| || | | |||| | | |||| |||||
Sbjct 1096332 GAAGTACCGCTCGGACATCAGGGTGTAGGTTGCTAATGCGCGGTCAATATCTCGGCCGTG 1096273
Query 111099 AATACCAATGGCAACTCGCATGAACAT 111125
||||||||||| || ||||| | |||
Sbjct 1096272 TATACCAATGGCTACACGCATCAGCAT 1096246
>seq9
Length=1254216
Score = 98.7 bits (108), Expect = 1e-15
Identities = 168/241 (70%), Gaps = 2/241 (1%)
Strand=Plus/Minus
Query 11667 ACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACG 11726
|||| ||| |||| |||||||||||| |||||||| | ||| || || || ||
Sbjct 856400 ACGCGACTTGCCGATAGCGTCAATCTCGTCGATGAAGATGATGCAGGGAGCGTGCTTCCG 856341
Query 11727 TGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAA 11786
||| |||| || || || ||||| | || ||||| ||||||||||| |||||
Sbjct 856340 CGCCGAGGCGAAGAGGTCTCGCACACGGGAAGGGCCGACACCGACGAACATCTCTACGAA 856281
Query 11787 GTTTGCGGCAGA-ACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGA 11845
| | | | || ||| | | |||||| || || | ||| |||||| |||| |||||
Sbjct 856280 CTCGGAGCCGGAGACAGAG-AGGAAGGGCACGTTCGCCTCGCCAGCGGTGGCCTTAGCGA 856222
Query 11846 GGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCAC 11905
| || |||||||| || || || | || | ||| | || |||||||| || || || |
Sbjct 856221 GCAGGGTCTTACCTGTTCCTGGAGGGCCGGAGAGGATCGCCCCACGGGGAATTTTAGCGC 856162
Query 11906 C 11906
|
Sbjct 856161 C 856161
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588975271142200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |