Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1 114 2e-20 seq6 82.4 9e-11 >seq1 Length=2114445 Score = 114 bits (126), Expect = 2e-20 Identities = 200/287 (70%), Gaps = 8/287 (3%) Strand=Plus/Minus Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333 ||||| || ||| | |||||||| ||||| || || || || ||||| || || Sbjct 847640 GCAAAGTCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCG 847581 Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393 ||||||||||| |||||||||| ||| | || || ||| || |||||||||||||| Sbjct 847580 GGCATGAGACCGCGCTTCTTCATCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATG 847521 Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AA 117452 ||||||||| || || || | || || || || |||| ||| |||| | | Sbjct 847520 CCCTCCACAGCGGCGAAGGCGACGAGACGTTCAGCAAAGG-TCGAACGCTTGTCCGAGAT 847462 Query 117453 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 117512 |||||||| |||||| | ||||| || ||| ||||| | || | ||||| || || Sbjct 847461 CCATTTCAATGCCCAGTCGGCCTTGCGCTTAATGCATGGAATGGTATCAATGGCATCGAA 847402 Query 117513 TA---ACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCA 117556 | | | || ||| | ||||||| |||||| ||||||||| Sbjct 847401 GAGATATTCACGCTGTTCGG---CATCCTTGATGTATGTGTCAATCA 847358 >seq6 Length=1460661 Score = 82.4 bits (90), Expect = 9e-11 Identities = 181/264 (69%), Gaps = 7/264 (3%) Strand=Plus/Plus Query 107051 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAG 107108 |||||||||||||||||||| ||||| ||| || || | | ||||| || || | Sbjct 567275 TGGATGTGCATCCCAATACCACCAGCAGTCTTGGAAATCATAGTGCACA-TCTTGCAG-G 567332 Query 107109 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 107168 | ||||||| || ||||| ||| ||||| |||| | ||||| || || | || Sbjct 567333 TATCATAGATGCCCTTGATACTGTCATCCTTCATGGCAACCAGGAAACAGAGAGAGAGCT 567392 Query 107169 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGG 107227 | || || | || |||||||| || | ||| | | ||| |||| ||||| | | Sbjct 567393 GAGGGTGGGGCATGCCGGCATTGAA-AGTGGTGGGCTAGGGTGTGTGAA-GTACCTCTCG 567450 Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCC 107287 ||||| | | | || |||| || | ||||| |||| | ||||||||| ||||| Sbjct 567451 GACATGAAGGTGGAGGTTGCCAATCCACAGTCAATATCTTGACTGTGGATGCCAATGGCT 567510 Query 107288 ACACGCATAAACATGTATTGGGGT 107311 ||| |||| | ||| | |||||| Sbjct 567511 ACATGCATCAGCATCTGCTGGGGT 567534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980069898760