Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1 114 2e-20
seq6 82.4 9e-11
>seq1
Length=2114445
Score = 114 bits (126), Expect = 2e-20
Identities = 200/287 (70%), Gaps = 8/287 (3%)
Strand=Plus/Minus
Query 117274 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCT 117333
||||| || ||| | |||||||| ||||| || || || || ||||| || ||
Sbjct 847640 GCAAAGTCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCG 847581
Query 117334 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 117393
||||||||||| |||||||||| ||| | || || ||| || ||||||||||||||
Sbjct 847580 GGCATGAGACCGCGCTTCTTCATCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATG 847521
Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTCA-AA 117452
||||||||| || || || | || || || || |||| ||| |||| | |
Sbjct 847520 CCCTCCACAGCGGCGAAGGCGACGAGACGTTCAGCAAAGG-TCGAACGCTTGTCCGAGAT 847462
Query 117453 CCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAA 117512
|||||||| |||||| | ||||| || ||| ||||| | || | ||||| || ||
Sbjct 847461 CCATTTCAATGCCCAGTCGGCCTTGCGCTTAATGCATGGAATGGTATCAATGGCATCGAA 847402
Query 117513 TA---ACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCA 117556
| | | || ||| | ||||||| |||||| |||||||||
Sbjct 847401 GAGATATTCACGCTGTTCGG---CATCCTTGATGTATGTGTCAATCA 847358
>seq6
Length=1460661
Score = 82.4 bits (90), Expect = 9e-11
Identities = 181/264 (69%), Gaps = 7/264 (3%)
Strand=Plus/Plus
Query 107051 TGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGAT--TTGCGCACACTCCGTAAGAG 107108
|||||||||||||||||||| ||||| ||| || || | | ||||| || || |
Sbjct 567275 TGGATGTGCATCCCAATACCACCAGCAGTCTTGGAAATCATAGTGCACA-TCTTGCAG-G 567332
Query 107109 TTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCT 107168
| ||||||| || ||||| ||| ||||| |||| | ||||| || || | ||
Sbjct 567333 TATCATAGATGCCCTTGATACTGTCATCCTTCATGGCAACCAGGAAACAGAGAGAGAGCT 567392
Query 107169 GCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGG 107227
| || || | || |||||||| || | ||| | | ||| |||| ||||| | |
Sbjct 567393 GAGGGTGGGGCATGCCGGCATTGAA-AGTGGTGGGCTAGGGTGTGTGAA-GTACCTCTCG 567450
Query 107228 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCC 107287
||||| | | | || |||| || | ||||| |||| | ||||||||| |||||
Sbjct 567451 GACATGAAGGTGGAGGTTGCCAATCCACAGTCAATATCTTGACTGTGGATGCCAATGGCT 567510
Query 107288 ACACGCATAAACATGTATTGGGGT 107311
||| |||| | ||| | ||||||
Sbjct 567511 ACATGCATCAGCATCTGCTGGGGT 567534
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589980069898760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |