Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq3 165 2e-35
seq14 161 2e-34
seq7 87.8 4e-12
>seq3
Length=1694370
Score = 165 bits (182), Expect = 2e-35
Identities = 162/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| || ||||| || || |||||||| || | |||||| | || || |||
Sbjct 423005 ACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGACCGTCCTCG 423064
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || ||||| ||||| ||||| |||||||| ||||| ||
Sbjct 423065 AGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGG 423124
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|||||| ||||||||| || ||||||||||| || || || ||||| | |||||
Sbjct 423125 ATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTTG 423184
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||||| ||| || || || | |||||
Sbjct 423185 CCTGTCAGAGTCTTGACAAAGATCTGCAT 423213
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| ||||| || || || ||||||||||| | || || | || || ||
Sbjct 423514 ACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGACAGGGTACGGCCGTCCTCA 423573
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || | || ||||| ||||| ||||| || ||||| ||
Sbjct 423574 AGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 423633
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||||| || || |||||||| || || || || || | |||||
Sbjct 423634 ATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGTGTGATGGTCTTG 423693
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||| || ||||| | |||||
Sbjct 423694 CCAGTGAGAGTCTTGACGAAGATCTGCAT 423722
>seq14
Length=1069518
Score = 161 bits (178), Expect = 2e-34
Identities = 161/209 (77%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || ||||| || ||||| || || |||||||| |||| ||| || | || || |||
Sbjct 1023955 ACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCGTCCTCG 1023896
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || || || ||||| ||||| || ||||| |||
Sbjct 1023895 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGA 1023836
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| |||||||| ||||| ||| ||||| || || | ||||||
Sbjct 1023835 ATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGACTTCGAGCGTGATGGTCTTT 1023776
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| ||||| || || ||||| | ||||||
Sbjct 1023775 CCCGTCAACGTCTTGACGAAGATTTGCAT 1023747
Score = 141 bits (156), Expect = 2e-28
Identities = 159/211 (75%), Gaps = 4/211 (2%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| || |||||||| || || || ||||| ||| ||||| | ||||| |||
Sbjct 1024183 ACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCG 1024124
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||||||||| || || ||||| ||||| || || || ||||| ||
Sbjct 1024123 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGG 1024064
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109
|| || ||| || || || ||||||| | | || || ||||| || || | |||||
Sbjct 1024063 ATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGAC--TCGACTTCGAGAGTGATCGTCT 1024006
Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || |||||||| || ||||| | |||||
Sbjct 1024005 TGCCAGTCAAAGTCTTCACGAAAATCTGCAT 1023975
Score = 138 bits (152), Expect = 3e-27
Identities = 159/213 (75%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| | |||||| ||||| || || || || ||||| |||| || || | ||||| ||
Sbjct 1023500 AACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTC 1023441
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|||||||| || ||||||||||| || || ||||| |||||||| || || ||||| ||
Sbjct 1023440 AAGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTG 1023381
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGT 195107
||| || ||||||||| || || ||||| ||| || || ||||| || | |||
Sbjct 1023380 AATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGA---CTCGACCTCAAGAGTGATCGT 1023324
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || |||| ||| || ||||| | |||||
Sbjct 1023323 CTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||||||||| || ||||| || ||||| ||||| || | || || | || |||||
Sbjct 1023727 ACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGACCGTCTTCC 1023668
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || || || || |||||||| || || || ||
Sbjct 1023667 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCCTGG 1023608
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || || |||||||| || || || || || | |||||
Sbjct 1023607 ATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAACCTCGAGTGTGATGGTCTTG 1023548
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || || || | |||||
Sbjct 1023547 CCGGTCAGGGTCTTCACAAAGATCTGCAT 1023519
>seq7
Length=1357966
Score = 87.8 bits (96), Expect = 4e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || ||||| || ||||| || ||||| |||| || || | || ||||||
Sbjct 1033430 ACGAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGAGAGTGTGCGGCCGTCTTCG 1033371
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
|||||||| || |||||||| || ||||| ||||| || || ||||
Sbjct 1033370 AGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGCGGGATGC 1033325
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109480192691933
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |