Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3 165 2e-35 seq14 161 2e-34 seq7 87.8 4e-12 >seq3 Length=1694370 Score = 165 bits (182), Expect = 2e-35 Identities = 162/209 (78%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| || ||||| || || |||||||| || | |||||| | || || ||| Sbjct 423005 ACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGACCGTCCTCG 423064 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || ||||| || ||||| ||||| ||||| |||||||| ||||| || Sbjct 423065 AGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGG 423124 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 |||||| ||||||||| || ||||||||||| || || || ||||| | ||||| Sbjct 423125 ATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACCTCGAGGGTGATGGTCTTG 423184 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||||| ||| || || || | ||||| Sbjct 423185 CCTGTCAGAGTCTTGACAAAGATCTGCAT 423213 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || |||||||| ||||| || || || ||||||||||| | || || | || || || Sbjct 423514 ACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGACAGGGTACGGCCGTCCTCA 423573 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || | || ||||| ||||| ||||| || ||||| || Sbjct 423574 AGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 423633 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || |||||||| || || |||||||| || || || || || | ||||| Sbjct 423634 ATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGTGTGATGGTCTTG 423693 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || ||||| | ||||| Sbjct 423694 CCAGTGAGAGTCTTGACGAAGATCTGCAT 423722 >seq14 Length=1069518 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || ||||| || ||||| || || |||||||| |||| ||| || | || || ||| Sbjct 1023955 ACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCGTCCTCG 1023896 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || || || ||||| ||||| || ||||| ||| Sbjct 1023895 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGA 1023836 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| |||||||| ||||| ||| ||||| || || | |||||| Sbjct 1023835 ATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGACTTCGAGCGTGATGGTCTTT 1023776 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| || || ||||| | |||||| Sbjct 1023775 CCCGTCAACGTCTTGACGAAGATTTGCAT 1023747 Score = 141 bits (156), Expect = 2e-28 Identities = 159/211 (75%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 |||||||| || |||||||| || || || ||||| ||| ||||| | ||||| ||| Sbjct 1024183 ACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCG 1024124 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || ||||||||||| || || ||||| ||||| || || || ||||| || Sbjct 1024123 AGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGG 1024064 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109 || || ||| || || || ||||||| | | || || ||||| || || | ||||| Sbjct 1024063 ATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGAC--TCGACTTCGAGAGTGATCGTCT 1024006 Query 195110 TTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | || |||||||| || ||||| | ||||| Sbjct 1024005 TGCCAGTCAAAGTCTTCACGAAAATCTGCAT 1023975 Score = 138 bits (152), Expect = 3e-27 Identities = 159/213 (75%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| ||||| || || || || ||||| |||| || || | ||||| || Sbjct 1023500 AACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTC 1023441 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || ||||||||||| || || ||||| |||||||| || || ||||| || Sbjct 1023440 AAGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTG 1023381 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| || ||||||||| || || ||||| ||| || || ||||| || | ||| Sbjct 1023380 AATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGA---CTCGACCTCAAGAGTGATCGT 1023324 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || |||| ||| || ||||| | ||||| Sbjct 1023323 CTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 ||||||||||| || ||||| || ||||| ||||| || | || || | || ||||| Sbjct 1023727 ACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGACCGTCTTCC 1023668 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || || || || || |||||||| || || || || Sbjct 1023667 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCCTGG 1023608 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||||||||| || || |||||||| || || || || || | ||||| Sbjct 1023607 ATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAACCTCGAGTGTGATGGTCTTG 1023548 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| || || || || | ||||| Sbjct 1023547 CCGGTCAGGGTCTTCACAAAGATCTGCAT 1023519 >seq7 Length=1357966 Score = 87.8 bits (96), Expect = 4e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || ||||| || ||||| || ||||| || ||||| |||| || || | || |||||| Sbjct 1033430 ACGAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGAGAGTGTGCGGCCGTCTTCG 1033371 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037 |||||||| || |||||||| || ||||| ||||| || || |||| Sbjct 1033370 AGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGCGGGATGC 1033325 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480192691933