Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq14 107 1e-18 seq3 102 5e-17 >seq14 Length=1069518 Score = 107 bits (118), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| ||| ||| ||||| ||||| ||||| || ||| | || |||| || Sbjct 1023500 AACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTC 1023441 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || || || || || || || |||||||| | || | ||||||||||| Sbjct 1023440 AAGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTG 1023381 Query 34892 AATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGG 34947 |||||| |||||| ||||||| || | | ||| || || | || || | Sbjct 1023380 AATCTTGGCCTTGACGT----TATCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATCG 1023325 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || || |||||||| || |||||||||||| Sbjct 1023324 TCTTGCCGGTCAGAGTCTTGACGAAGATCTGCATA 1023290 Score = 102 bits (112), Expect = 5e-17 Identities = 141/195 (72%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| |||||||| || | || | || |||||||| || ||||| || Sbjct 1023709 TCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGACCGTCTTCCAGCTGCTTGCCGGCGAAG 1023650 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | |||||||| || ||||| ||||| Sbjct 1023649 ATGAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGAC---- 1023594 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||||| | ||| | |||||| |||| || ||||| || || || || ||||| Sbjct 1023593 GTTATCGATAGTGTCCGATGACTCAACCTCGAGTGTGATGGTCTTGCCGGTCAGGGTCTT 1023534 Query 34967 CACAAAGATCTGCAT 34981 ||||||||||||||| Sbjct 1023533 CACAAAGATCTGCAT 1023519 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| || || ||||| |||||| | || | || || ||||| || ||||| || Sbjct 1023937 TCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAG 1023878 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||| || | || | ||||||||||| |||||| ||||| Sbjct 1023877 ATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGAC---- 1023822 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | |||| || | ||| | || || |||| || ||||| |||||||| | ||||| Sbjct 1023821 GTTATCAATGGTATCCGACGATTCGACTTCGAGCGTGATGGTCTTTCCCGTCAACGTCTT 1023762 Query 34967 CACAAAGATCTGCATA 34982 || ||||| |||||| Sbjct 1023761 GACGAAGATTTGCATA 1023746 >seq3 Length=1694370 Score = 102 bits (112), Expect = 5e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| ||| ||| ||||| || || || ||||| ||| | || | || || Sbjct 423514 ACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGACAGGGTACGGCCGTCCTCA 423573 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || || || || || | |||||||| | || | ||||||||||| Sbjct 423574 AGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCCTGG 423633 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| ||||||| | |||| || || ||| || |||| || ||||| || Sbjct 423634 ATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGTGTGATGGTCTTG 423693 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || ||||||||||| || ||||||||||| Sbjct 423694 CCAGTGAGAGTCTTGACGAAGATCTGCAT 423722 Score = 89.7 bits (98), Expect = 3e-13 Identities = 149/213 (70%), Gaps = 8/213 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| || || ||||| || || ||||| ||||| | || | || || Sbjct 423005 ACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGACCGTCCTCG 423064 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || || ||||| || || ||||||||||| | || | || |||||||| Sbjct 423065 AGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGG 423124 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948 || || ||||| | | ||||| | ||| | ||| || |||| ||| ||||| Sbjct 423125 ATTTTTGCCTTGAC----GTTGTCGATGGTGTCCGATGACTCGACCTCGAGGGTGATGGT 423180 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || |||||||| |||||||||||||| Sbjct 423181 CTTGCCTGTCAGAGTCTTGACAAAGATCTGCAT 423213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633208309272