Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2 167 2e-35 >seq2 Length=2036205 Score = 167 bits (184), Expect = 2e-35 Identities = 513/783 (66%), Gaps = 14/783 (2%) Strand=Plus/Plus Query 551799 CATCTTGGTGGCGAAGATTTTGATAATAGACTGGT--ATCATGGTGTGTTGAAGATTTTA 551856 ||||||||||| |||||||||||||| | ||||| | || | ||| |||| || | Sbjct 840912 CATCTTGGTGGTGAAGATTTTGATAACCGCCTGGTGAACCA--CTTTGTCCAAGAGTTCA 840969 Query 551857 AACGAAAAAACAAAGTTGATCTATCTACATCTGCCAAAGCTCTTCGTCGTCTAAGAACTG 551916 | || || |||| ||||| || || ||| | || |||||||| | || | Sbjct 840970 AGCGCAAGTACAAGAAGGATCTGTCCTCAAACGCCCGTTCCCTCCGTCGTCTCCGTACCG 841029 Query 551917 CTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTAGATT 551976 ||||||| | || || || |||| || || | |||||||| | || ||| | || | Sbjct 841030 CTTGCGAGCGTGCGAAGCGTACTCTGTCTTCCGCCGCTCAAACCTCCATCGAAATCGACT 841089 Query 551977 CATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGATATTT 552036 || | || ||||| || || | | || | || | | ||| || || || ||| Sbjct 841090 CACTGTTCGAGGGTATCGACTTCTACACCTCCATCACCCGCGCCCGTTTCGAGGAGCTTT 841149 Query 552037 GTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCAAAGA 552096 | |||||||| | || |||| || || || | || || | || || |||| Sbjct 841150 GCCAGGATCTCTTCCGTTCCACTCTTGAGCCGGTCGAGAAGGTGTTGCGTGACTCGAAGA 841209 Query 552097 TTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCCTAAAA 552156 | || || |||| || || ||||| ||||| |||||||| || || | |||||| | Sbjct 841210 TCGACAAGGCCAATGTGCACGAAATCGTGCTCGTTGGTGGCTCCACCCGCATTCCTCGTA 841269 Query 552157 TTCGCGAAATGTTAAGTTCT---TATTTCAATGGTAAAAAATTAAATGAAAGTGTTAATC 552213 || | || || | ||| | ||||| || || | || | || | || | Sbjct 841270 TTATC--AAGCTTGTG-TCTGACTTCTTCAACGGCAAGGAGCCCAACAAGAGCATCAACC 841326 Query 552214 CAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAAACTG 552273 | |||||||| ||||||||||||||||| | ||||| ||||| || || || | ||| Sbjct 841327 CCGATGAGGCCGTTGCCTATGGTGCCGCCGTCCAAGCCGCTATCCTGTCCGGTGACACTT 841386 Query 552274 ATGA-AAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAA 552332 || || ||| ||| || || | ||| | |||||| | ||||| || || ||| | ||| Sbjct 841387 CGGAGAAGACT-CAAGATCTTCTGCTTCTCGATGTTTCCCCTCTCTCCCTCGGTATCGAA 841445 Query 552333 ACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAAAAA 552392 || | ||| ||| | ||||| ||| || | || || || || | || ||||| Sbjct 841446 ACTGCTGGTGGTGTCATGACCCCTCTGATTAAGAGGAACACGACCGTGCCCACCAAAAAG 841505 Query 552393 TCTCGTG-TATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTTGA 552451 || || | | || || ||||| | || || || | | ||| ||||| | | || Sbjct 841506 TC-CGAGATCTTCTCCACGTACGCCGACAACCAGCCCGGTGTGCTCATTCAGGTCTACGA 841564 Query 552452 AGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAGGTAT 552511 || || | | ||| || || || || || || | || | | || || Sbjct 841565 GGGTGAGCGTGCACGCACGAAGGACAACAACTTGCTGGGCAAGTTCGAGCTGTCGGGCAT 841624 Query 552512 TCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCAATGG 552571 ||||||||| || ||||| || || ||||||||||| || ||||||||||||||||| || Sbjct 841625 TCCTCCTGCACCCCGTGGTGTTCCCCAAATTGAAGTCACCTTCGATATCGATGCCAACGG 841684 Query 552572 AAT 552574 || Sbjct 841685 TAT 841687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029290764433510