Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq6 199 7e-46 seq1 170 4e-37 >seq6 Length=1460661 Score = 199 bits (220), Expect = 7e-46 Identities = 602/918 (66%), Gaps = 29/918 (3%) Strand=Plus/Minus Query 212688 AGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCT 212747 ||||| | ||||| | |||||||||| ||||| | ||| ||| ||||| | ||| Sbjct 1097969 AGATGGACGTTCAAGCTCTGACTCTGGCAGATGAACGCACCCCGGTCCGCGGCGAGGTCG 1097910 Query 212748 ATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGG 212807 | ||| | |||| |||| |||||| ||||||||| |||| |||||| || || ||| Sbjct 1097909 AGGATCTTCTTCTGTGAGATCTCCCAGACGGTCTTGTAGATCGCTTTGATGTTGTCCGGG 1097850 Query 212808 AAGCCGGGGATGTTCTGCACAGACCCCCTGTGT---ATGGTCAGCTGCAGGCGCATGTCC 212864 | |||||||||||||| | ||||| | | ||| ||| | | ||||| | Sbjct 1097849 ATTCCGGGGATGTTCTGGATCGACCCGCCGGAAGCGATGATCATATCC---CGCATCTGG 1097793 Query 212865 TCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGA-GGGTTGACTATCTGGAA 212923 |||||||| ||||| | || || | | || | | | ||| ||| | |||||| Sbjct 1097792 TCGTTCCATAGGCCGA-GATCGACAAGATCGCGAAGAAGCCACGGGCAGACAACCTGGAA 1097734 Query 212924 GTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTT 212983 || || | ||| || | | | ||| | | || || || ||||||| || |||||| Sbjct 1097733 CTCGCCGGCGAGTACACGACGCGCGTAGATCATAGATGTATACGGCTCGAAGCACTCGTT 1097674 Query 212984 GTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCT 213043 ||||||||| ||||| | |||| ||| || ||||| || || | ||||| ||| | Sbjct 1097673 GTTCCCCAGGATCTGGGAAGTGGAGGCGGTAGGCATAGGGGCAAGGAGGAGGGAGTTGCG 1097614 Query 213044 CACTCC-GTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGT 213102 || || |||| || ||| | ||| | ||||||||||| | | | || ||| Sbjct 1097613 CAGACCCGTGCG-GCTGATCTTCTCCTTCAGCCCGGCCCAGTCCCAGCGGTCGGA-AGG- 1097557 Query 213103 CCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCT 213162 | ||||| ||| | ||||||||| | || | | ||| ||| | Sbjct 1097556 -------CATCACGCCCCATAGGTCAAACTGGAGCTCTCCACGGGAAGCAGGGGAGCCTT 1097504 Query 213163 GGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGT 213222 | | | ||| | ||| | | || ||||| |||| ||||||| || ||||||| Sbjct 1097503 CGAACGTCTCGTACGCGCCGTCCGTCTCGGCCATCTCGTTCGACGCCTCGAGCGCAGCGT 1097444 Query 213223 AGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCA 213282 |||||| || || || || || | ||| |||| || || || || ||| |||| Sbjct 1097443 GGTAGATAGTCTCGAAGATATCGCGGTTAAGCTGACGAGCTTCGGGCGAGTCGAACGGCA 1097384 Query 213283 TCATCAT-GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGT 213341 | | || | ||| | || || || ||||| || || | |||||| || | ||| Sbjct 1097383 TGCGAAGAGCCATA-AACGCGTCGGCGAGACCCTGCACACCAACGCCGATAGGACGGTGA 1097325 Query 213342 CTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTT 213400 | || |||||| |||| ||| || ||| || ||||| |||||||| ||| Sbjct 1097324 CGCATATTAGACCGACGAGC-CTCAGGCACGGGATAGTAGTTGACATCGATGATTCGGTT 1097266 Query 213401 GAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCC 213460 |||||| | | |||| |||| ||| | ||| | |||| || |||| Sbjct 1097265 CAGGTTGAACGCGACCACCTTGGCGACCGCGTGCAGCTTCTCG------AAGTCGTACTG 1097212 Query 213461 CCCGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTG 213520 |||||||| | || ||||| ||| ||| ||| || ||||| ||||| ||||| | Sbjct 1097211 ACCGTCCTGGATGAAGGAAGGCAAGGCAATGGAGGCGAGATTGCAGACGGCGACCTCGTC 1097152 Query 213521 AGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTT 213580 || | | | ||||||||||| || ||||| |||||| | ||| ||||||||||| Sbjct 1097151 AGGGGCGGAATACTCCATGATTTCTGTGCAGAGGTTGGAAGACTTGATCGTGCCCAGGTT 1097092 Query 213581 CTGGTGGTTTGACTTTGC 213598 || ||||| ||||| || Sbjct 1097091 CTTCTGGTTAGACTTGGC 1097074 >seq1 Length=2114445 Score = 170 bits (188), Expect = 4e-37 Identities = 364/538 (68%), Gaps = 13/538 (2%) Strand=Plus/Minus Query 47843 TAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCCATG 47902 |||||| |||| ||||| |||||||||||||| |||| | |||||| |||||| Sbjct 847928 TAGTCCGATACTCGTTTCTCGAAGAAGTTTGTCTTTCCCTGAAGGGAGATGAGGTCCATG 847869 Query 47903 AAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCAGGTG 47961 ||| ||||||||| | |||||| ||| | || ||| | | || ||| | Sbjct 847868 AAGTCGAAGGGGTTCGTGACGTTATAGACCT-TCTCGTTGCCGAGAGCGACAAGAAGGCG 847810 Query 47962 ATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACAC 48021 ||| |||||| |||| ||||| | ||| ||| | ||||||||| ||||| | || Sbjct 847809 ATCGGCGACGAACTCTATGTACTGGTTCATTAGGTTCGAGTTCATGCCGATGAGCGCGAC 847750 Query 48022 GGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTT 48081 || | || | ||||| || | || ||| | || || || | || | Sbjct 847749 AGGAAGGGCATCCGTGAGGAAAGTTTGTTCGATCAGTACCGCCTCAGTAATGATTTTGCG 847690 Query 48082 AACG----CGGGACTCTGAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAA 48137 ||| ||||| || ||| ||| ||||| || |||| | ||| |||| Sbjct 847689 GACGGTGTCGGGA---TGTGGGCGCCG-GCGGAGGTGGCTGA---AGAGTAGGCATGCAA 847637 Query 48138 AGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCA 48197 |||| |||||| ||| || || ||| ||||||| |||||||||| ||||| |||| Sbjct 847636 AGTCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCGGGCA 847577 Query 48198 TGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCT 48257 ||| || | || || | |||||| || || ||||| ||||| |||||||||||||||| Sbjct 847576 TGAGACCGCGCTTCTTCATCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATGCCCT 847517 Query 48258 CCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGG 48317 |||| || ||||| ||| ||| | || | || | | |||||| |||||||| Sbjct 847516 CCACAGCGGCGAAGGCGACGAGACGTTCAGCAAAGGTCGAACGCTTGTCCGAGATCCATT 847457 Query 48318 AAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375 | |||||||| ||||| ||| |||||||| || || || ||||| |||||| Sbjct 847456 TCAATGCCCAGTCGGCCTTGCGCTTAATGCATGGAATGGTATCAATGGCATCGAAGAG 847399 Score = 109 bits (120), Expect = 1e-18 Identities = 159/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 48455 ATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGCACTTCTGTGGAGAATCTCTCC 48514 || ||||| ||||||||| | ||||||| ||||||| || || || | ||| Sbjct 847269 ATTTGGAAACCGTAGAAGCATCGGGCCTCAGCAGCCTGCACCTCATTGCTAAACCGCTCA 847210 Query 48515 AGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAGAAGGCAAGGACATGTTTAAGG 48574 | |||||||| ||||| || || || |||||||| ||||| |||||||| || | | Sbjct 847209 ACGAGATTCTCGTTGACGATGCCGTCGGAAGCAGCGAAGAAAGCAAGGACGTGGGAGATG 847150 Query 48575 AAATGGCGCTCGTTGTGGGTGAGAGCATT---CCAGCCCTGTACGTCTTTGCCCAGGTCC 48631 ||||| |||||||| | | | ||| || |||| | || | || ||| ||||||| Sbjct 847149 AAATGACGCTCGTTATTGTTCAGACGGTTTTGCCAGTCATGGAGATCCTTGGACAGGTCC 847090 Query 48632 ACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTTTTTGTACAT 48675 | || || | ||||||||||| || ||| || |||||||| Sbjct 847089 ATCTCCTCTGCTGTCCAGAAGGATGCCTCTGCCTTCTTGTACAT 847046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931531647228160