Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1 125 9e-23 seq6 109 7e-18 seq17 100 3e-15 seq2 86.0 8e-11 >seq1 Length=2114445 Score = 125 bits (138), Expect = 9e-23 Identities = 202/287 (70%), Gaps = 9/287 (3%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || || ||||| ||| | |||||| || | || ||||||||||| ||||||||| Sbjct 847622 CCCTCATCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCGGGCATGAGACCGCGCTTC 847563 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || | ||| |||||||| ||| ||| ||||| ||||||||||| || ||||| ||| Sbjct 847562 TTCATCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATGCCCTCCACAGCGGCGAAG 847503 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359 ||| ||| || || |||||| ||||| | || | |||||| |||| |||||| Sbjct 847502 GCGACGAGACGTTCAGCAAAG--GTCGA-ACGCTTGTCCGAGATCCATTTCAATGCCCAG 847446 Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC---CTTT 869416 |||||||| | | | | || | || || ||||| ||||| | || || | Sbjct 847445 TCGGCCTTGCGCTTAATGCATGGAATGGTATCAATGGCATCGAAGAGATATTCACGCTGT 847386 Query 869417 TCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 ||||| ||||||| || ||||| |||||||| || || ||||| Sbjct 847385 TCGGC---ATCCTTGATGTATGTGTCAATCAGGAGAGAGTATGTCTC 847342 Score = 93.3 bits (102), Expect = 5e-13 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 |||||||| || || || || |||||| ||||| ||||| |||| || ||||| Sbjct 847937 GCCTTGGCATAGTCCGATACTCGTTTCTCGAAGAAGTTTGTCTTTCCCTGAAGGGAGATG 847878 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810 | ||||| | ||| ||||| | || ||| ||| ||| ||||| | | Sbjct 847877 AGGTCCATGAAGTCGAAGGGGTTCGTGACGTTATAGACCTTCTCGTTGCCGAGAGCGACA 847818 Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870 || ||||| |||||||| ||||| ||||||||| ||| ||| | ||||||||||||| Sbjct 847817 AGAAGGCGATCGGCGACGAACTCTATGTACTGGTTCATTAGGTTCGAGTTCATGCCGATG 847758 Query 868871 AGCGCCACCGGCAG 868884 ||||| || || || Sbjct 847757 AGCGCGACAGGAAG 847744 >seq6 Length=1460661 Score = 109 bits (120), Expect = 7e-18 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 1628388 CAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCG 1628447 || ||| ||||| || || || ||||| |||||||| || ||| | | |||| Sbjct 1096862 CATGCCAGGCGCTTCATTAGGGCAGAAGAGAGACCAGTCACCGTCGGACTCGACGCGCTT 1096803 Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507 ||| || || || | |||| || ||||| || ||||| || || || |||||||| Sbjct 1096802 CATGAACAGATCTGAAATCCAGAGGGCGTAGAAAAGGTCACGTGCGCGCACTTCCTCCTT 1096743 Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567 |||||||||||| |||||||| | |||| | |||||||||||| ||||| | ||| Sbjct 1096742 GCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAAGACGTCGGCGTGCCAGGGCTCGATGTA 1096683 Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600 | |||||||| || ||||||| ||||| Sbjct 1096682 GATAGCAAAGGCACCGGGGCGCTTGTTACCGCC 1096650 Score = 89.7 bits (98), Expect = 6e-12 Identities = 106/141 (75%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 1630183 CCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCC 1630241 || || || || || | |||||| || | ||||| ||| ||||| || || |||||||| Sbjct 1096484 CCAATACCACCAGCGGTCTTGGAAATCATTGCGCA-TGTCTTGAGGGTATCATAGATGCC 1096426 Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301 |||||| |||| |||||||| | || || || || || ||| || || || | ||| Sbjct 1096425 CTCGATACTGTCGTCCTTCATGGCAACCAGGAAACAGGAAGAGAGCTGAGGATGGGGCGT 1096366 Query 1630302 GCCGGCGTTGAAGAGCGTGGG 1630322 |||||| ||||||||||| || Sbjct 1096365 GCCGGCATTGAAGAGCGTCGG 1096345 >seq17 Length=872506 Score = 100 bits (110), Expect = 3e-15 Identities = 112/147 (76%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106 ||||||||||| ||||| || || |||||| || ||||| || | || || |||||| Sbjct 242693 GACAGCATCGGAGGCACAGTCACATGCGTGATCCGGAACGTCCCCTCGGGACTGGGCGAG 242752 Query 19107 -CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCAC 19165 ||||| || |||||| ||||||| |||||| || || ||||| || | || ||||| Sbjct 242753 CCCGTG-TTCGACAAGTTCGAGGCGAAGCTCGCGCATGCGATGCTTTCCGTACCAGCCAC 242811 Query 19166 CAAGGGATTCGAGATTGGCAGCGGGTT 19192 || || |||||||||||| ||||| Sbjct 242812 AAAAGGGTTCGAGATTGGCTCTGGGTT 242838 >seq2 Length=2036205 Score = 86.0 bits (94), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 1592219 GATCTTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGC 1592278 ||| |||| |||||| | || || |||||||||||||| |||||||| |||||||||||| Sbjct 567069 GATGTTGGCTGCAAGACCGTCGCTAACATGATCAAGGGGAAGTCGCCTGAGGAGATCCGC 567128 Query 1592279 AAGACCTTTAACATC 1592293 ||| ||||||||| Sbjct 567129 AAGCTTTTTAACATC 567143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107131075596383