Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq1 125 9e-23
seq6 109 7e-18
seq17 100 3e-15
seq2 86.0 8e-11
>seq1
Length=2114445
Score = 125 bits (138), Expect = 9e-23
Identities = 202/287 (70%), Gaps = 9/287 (3%)
Strand=Plus/Minus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|| || ||||| ||| | |||||| || | || ||||||||||| |||||||||
Sbjct 847622 CCCTCATCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCGGGCATGAGACCGCGCTTC 847563
Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299
|| | ||| |||||||| ||| ||| ||||| ||||||||||| || ||||| |||
Sbjct 847562 TTCATCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATGCCCTCCACAGCGGCGAAG 847503
Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCATCGCCCAG 869359
||| ||| || || |||||| ||||| | || | |||||| |||| ||||||
Sbjct 847502 GCGACGAGACGTTCAGCAAAG--GTCGA-ACGCTTGTCCGAGATCCATTTCAATGCCCAG 847446
Query 869360 TCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC---CTTT 869416
|||||||| | | | | || | || || ||||| ||||| | || || |
Sbjct 847445 TCGGCCTTGCGCTTAATGCATGGAATGGTATCAATGGCATCGAAGAGATATTCACGCTGT 847386
Query 869417 TCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
||||| ||||||| || ||||| |||||||| || || |||||
Sbjct 847385 TCGGC---ATCCTTGATGTATGTGTCAATCAGGAGAGAGTATGTCTC 847342
Score = 93.3 bits (102), Expect = 5e-13
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
|||||||| || || || || |||||| ||||| ||||| |||| || |||||
Sbjct 847937 GCCTTGGCATAGTCCGATACTCGTTTCTCGAAGAAGTTTGTCTTTCCCTGAAGGGAGATG 847878
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
| ||||| | ||| ||||| | || ||| ||| ||| ||||| | |
Sbjct 847877 AGGTCCATGAAGTCGAAGGGGTTCGTGACGTTATAGACCTTCTCGTTGCCGAGAGCGACA 847818
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
|| ||||| |||||||| ||||| ||||||||| ||| ||| | |||||||||||||
Sbjct 847817 AGAAGGCGATCGGCGACGAACTCTATGTACTGGTTCATTAGGTTCGAGTTCATGCCGATG 847758
Query 868871 AGCGCCACCGGCAG 868884
||||| || || ||
Sbjct 847757 AGCGCGACAGGAAG 847744
>seq6
Length=1460661
Score = 109 bits (120), Expect = 7e-18
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 1628388 CAGGCCGGGCGCCTCGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCG 1628447
|| ||| ||||| || || || ||||| |||||||| || ||| | | ||||
Sbjct 1096862 CATGCCAGGCGCTTCATTAGGGCAGAAGAGAGACCAGTCACCGTCGGACTCGACGCGCTT 1096803
Query 1628448 CATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTT 1628507
||| || || || | |||| || ||||| || ||||| || || || ||||||||
Sbjct 1096802 CATGAACAGATCTGAAATCCAGAGGGCGTAGAAAAGGTCACGTGCGCGCACTTCCTCCTT 1096743
Query 1628508 GCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTA 1628567
|||||||||||| |||||||| | |||| | |||||||||||| ||||| | |||
Sbjct 1096742 GCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAAGACGTCGGCGTGCCAGGGCTCGATGTA 1096683
Query 1628568 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 1628600
| |||||||| || ||||||| |||||
Sbjct 1096682 GATAGCAAAGGCACCGGGGCGCTTGTTACCGCC 1096650
Score = 89.7 bits (98), Expect = 6e-12
Identities = 106/141 (75%), Gaps = 2/141 (1%)
Strand=Plus/Minus
Query 1630183 CCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGT-TTGAGCGTGTCGTAGATGCC 1630241
|| || || || || | |||||| || | ||||| ||| ||||| || || ||||||||
Sbjct 1096484 CCAATACCACCAGCGGTCTTGGAAATCATTGCGCA-TGTCTTGAGGGTATCATAGATGCC 1096426
Query 1630242 CTCGATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGT 1630301
|||||| |||| |||||||| | || || || || || ||| || || || | |||
Sbjct 1096425 CTCGATACTGTCGTCCTTCATGGCAACCAGGAAACAGGAAGAGAGCTGAGGATGGGGCGT 1096366
Query 1630302 GCCGGCGTTGAAGAGCGTGGG 1630322
|||||| ||||||||||| ||
Sbjct 1096365 GCCGGCATTGAAGAGCGTCGG 1096345
>seq17
Length=872506
Score = 100 bits (110), Expect = 3e-15
Identities = 112/147 (76%), Gaps = 2/147 (1%)
Strand=Plus/Plus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAG 19106
||||||||||| ||||| || || |||||| || ||||| || | || || ||||||
Sbjct 242693 GACAGCATCGGAGGCACAGTCACATGCGTGATCCGGAACGTCCCCTCGGGACTGGGCGAG 242752
Query 19107 -CCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCAC 19165
||||| || |||||| ||||||| |||||| || || ||||| || | || |||||
Sbjct 242753 CCCGTG-TTCGACAAGTTCGAGGCGAAGCTCGCGCATGCGATGCTTTCCGTACCAGCCAC 242811
Query 19166 CAAGGGATTCGAGATTGGCAGCGGGTT 19192
|| || |||||||||||| |||||
Sbjct 242812 AAAAGGGTTCGAGATTGGCTCTGGGTT 242838
>seq2
Length=2036205
Score = 86.0 bits (94), Expect = 8e-11
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 1592219 GATCTTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGC 1592278
||| |||| |||||| | || || |||||||||||||| |||||||| ||||||||||||
Sbjct 567069 GATGTTGGCTGCAAGACCGTCGCTAACATGATCAAGGGGAAGTCGCCTGAGGAGATCCGC 567128
Query 1592279 AAGACCTTTAACATC 1592293
||| |||||||||
Sbjct 567129 AAGCTTTTTAACATC 567143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107131075596383
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |