Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-20 seq6 102 7e-17 seq14 98.7 9e-16 >seq3 Length=1694370 Score = 114 bits (126), Expect = 1e-20 Identities = 171/239 (72%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || || || || || || ||||| || || | | Sbjct 423213 ATGCAGATCTTTGTCAAGACTCTGACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCG 423154 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || ||||| ||||| ||||| ||||| || |||||||| || Sbjct 423153 GACACCATCGACAACGTCAAGGCAAAA-ATCCAGGACAAGGAAGGCATCCCTCCCGACCA 423095 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||| |||||||||| || || ||||| ||||| | | | || || || || Sbjct 423094 GCAACGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCTGACTACAA 423035 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGCGGAACTGAGC 24941 || || ||||| ||||| || ||| ||||| | || | || || ||| |||||||| Sbjct 423034 TATCCAGAAGGAGTCGACGCTTCACCTGGTGCTCCGTCTCCGTGGCGGC--AACTGAGC 422978 Score = 100 bits (110), Expect = 3e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || ||||| || || || | Sbjct 423722 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACACTCGAGGTCGAGTCCTCG 423663 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || ||| |||||||| ||||| || || || ||||| || || Sbjct 423662 GACACGATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 423603 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||| || || || ||||| ||||| | | | |||| ||||| || Sbjct 423602 CAGAGGCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACCCTGTCGGATTACAAT 423543 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913 || || |||||||| || || ||| ||||| Sbjct 423542 ATCCAGAAGGAATCCACCCTTCACCTGGTG 423513 >seq6 Length=1460661 Score = 102 bits (112), Expect = 7e-17 Identities = 325/499 (65%), Gaps = 4/499 (1%) Strand=Plus/Minus Query 138508 ACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGGCTCAAAC 138567 ||||| || || ||||| | ||| ||||| |||| || | || | ||||| || Sbjct 1097741 ACCTGGAACTCGCCGGCGAGTACACGACGCGCGTAGATCATAGATGTATACGGCTCGAAG 1097682 Query 138568 GATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCACCAAAAGA 138627 | |||||||| ||||| ||||| | |||| ||||| ||||| || | | || Sbjct 1097681 CACTCGTTGTTCCCCAGGATCTGGGAAGTGGAGGCGGTAGGCATAGGGGCAAGGAGGAGG 1097622 Query 138628 GAATTCCGTAAACC-GTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCACAAATC 138686 || || || | ||| ||| ||| ||| ||||| ||| | ||||||||| || Sbjct 1097621 GAGTTGCGCAGACCCGTGCGGCT-GATCTTCTCCTTCAGCCCGGCCCAGTCCCAGCGGTC 1097563 Query 138687 GCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACTGCCTTC 138746 | ||| | | ||| | || |||| | | ||| || || |||||| Sbjct 1097562 GGAAGGCATCACGCCCCATAGGTCAAACTGGAGCTCTCCACGGGAAGCAGGGGAGCCTTC 1097503 Query 138747 GTACGAATCGTATACACCAAAC-TCTTGCGCCAACTCGTTGCTCGCCTCGAGCGCACCAT 138805 | ||| ||||| | || | ||| | |||| |||||| ||||||||||||| | | Sbjct 1097502 GAACGTCTCGTACGCGCCGTCCGTCTCG-GCCATCTCGTTCGACGCCTCGAGCGCAGCGT 1097444 Query 138806 AGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTACGGCA 138865 ||| ||||| ||| || | | || ||| || || |||| ||| |||||| Sbjct 1097443 GGTAGATAGTCTCGAAGATATCGCGGTTAAGCTGACGAGCTTCGGGCGAGTCGAACGGCA 1097384 Query 138866 TGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCGATGGC 138925 |||| || | | ||||||||||| || || ||||| || || |||| ||| || || | Sbjct 1097383 TGCGAAGAGCCATAAACGCGTCGGCGAGACCCTGCACACCAACGCCGATAGGACGGTGAC 1097324 Query 138926 GCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTTGTTTA 138985 ||| ||| ||| || | | ||||| ||||| |||||||||||| ||| | Sbjct 1097323 GCATATTAGACCGACGAGCCTCAGGCACGGGATAGTAGTTGACATCGATGATTCGGTTCA 1097264 Query 138986 AATTTCGCACGACCACCTT 139004 || | |||||||||| Sbjct 1097263 GGTTGAACGCGACCACCTT 1097245 >seq14 Length=1069518 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || ||||| || || || || || || || || | | | Sbjct 1023291 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACTCTTGAGGTCGAGTCGAGC 1023350 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || ||||| || || Sbjct 1023351 GACACTATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 1023410 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || | ||||| || ||||| ||||| |||||| | | | | || || || ||| Sbjct 1023411 CAGCGCCTTATCTTCGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 1023470 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGT 24912 || || |||||||| || || |||||||| Sbjct 1023471 ATCCAGAAGGAATCCACCCTTCACTTGGT 1023499 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || || || ||||| || || | | Sbjct 1023519 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACACTCGAGGTTGAGTCATCG 1023578 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || || || || || || ||||| Sbjct 1023579 GACACTATCGATAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCTGATCAG 1023638 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGA--TTCGAGAAACATGTCAGATTATA 24881 || ||| | ||||| ||||| || |||||||| || ||| | || | || || || | Sbjct 1023639 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGTCG-CACAC-TCTCGGACTACA 1023696 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||||| ||||| || || || ||| | ||| | || | ||||| || Sbjct 1023697 ACATTCAGAAGGAGTCAACGCTTCACCTTGTGCTTCGTCTCCGCGGTGG 1023745 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || ||| | || || || || || ||||||||||| ||| | | Sbjct 1023747 ATGCAAATCTTCGTCAAGACGTTGACGGGAAAGACCATCACGCTCGAAGTCGAATCGTCG 1023806 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| || || || ||||||||||| Sbjct 1023807 GATACCATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGATCAG 1023866 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||||| ||||| | | | | || || || || Sbjct 1023867 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCCGACTACAAT 1023926 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || || | ||| |||| Sbjct 1023927 ATCCAGAAGGAGTCTACCCTTCATCTCGTGCTGCG 1023961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449897043251720