Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1 134 2e-25 seq6 127 3e-23 >seq1 Length=2114445 Score = 134 bits (148), Expect = 2e-25 Identities = 188/263 (71%), Gaps = 3/263 (1%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 || ||||||||||| ||||||||||| | ||| ||||||||| ||| ||| ||||| Sbjct 847586 AGACCGGGCATGAGACCGCGCTTCTTCATCCAGAAGATGGCAGCGAAGGAGCCGGAGAAG 847527 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 ||||||||||| || ||||| ||| ||||||| || || ||||| || | | || Sbjct 847526 AAGATGCCCTCCACAGCGGCGAAGGCGACGAGACGTTCAGCAAAGGT---CGAACGCTTG 847470 Query 794497 TTGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATG 794556 | |||||| |||| ||||| || ||||| | | | | || | || || ||| Sbjct 847469 TCCGAGATCCATTTCAATGCCCAGTCGGCCTTGCGCTTAATGCATGGAATGGTATCAATG 847410 Query 794557 GCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAG 794616 || ||||| | || || | | ||||||| ||| ||||| || ||||| ||| Sbjct 847409 GCATCGAAGAGATATTCACGCTGTTCGGCATCCTTGATGTATGTGTCAATCAGGAGAGAG 847350 Query 794617 TAGGTCTCTGAGTGGATGTTTTC 794639 || ||||||||||||||||| || Sbjct 847349 TATGTCTCTGAGTGGATGTTCTC 847327 Score = 107 bits (118), Expect = 3e-17 Identities = 175/250 (70%), Gaps = 4/250 (2%) Strand=Plus/Minus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 || || ||||||||||| || || || |||||| ||||| ||||| |||| || Sbjct 847943 ACACCGGCCTTGGCATAGTCCGATACTCGTTTCTCGAAGAAGTTTGTCTTTCCCTGAAGG 847884 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||| | ||||| | ||| ||||| | ||| | ||| ||||||| |||| Sbjct 847883 GAGATGAGGTCCATGAAGTCGAAGGGGTTCGTGACGTTA--TAGACCTTCTCGTTGCCGA 847826 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 | | |||| ||||| ||||||||||| || ||||||||| ||| ||| | ||||| Sbjct 847825 GAGCGACAAGAAGGCGATCGGCGACGAACTCTATGTACTGGTTCATTAGGTTCGAGTTCA 847766 Query 794071 TGCCGATGAGCGCCACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCT 794130 ||||||||||||| || || || | || ||| || || |||||| || |||| Sbjct 847765 TGCCGATGAGCGCGACAGGAAGGGCATCCGTGAGGAAAGTTTGTTCGATCAGTACCGCCT 847706 Query 794131 CGATGATGAT 794140 | | ||||| Sbjct 847705 CAGTAATGAT 847696 >seq6 Length=1460661 Score = 127 bits (140), Expect = 3e-23 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 2071800 CAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCACCACGCGGCG 2071859 || ||| ||||| || ||||| ||||| |||||||| ||| | | | | ||||| Sbjct 1096862 CATGCCAGGCGCTTCATTAGGGCAGAAGAGAGACCAGTCACCGTCGGACTCGACGCGCTT 1096803 Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919 ||| ||||| || | |||| ||| |||| || || || || || || |||||||| Sbjct 1096802 CATGAACAGATCTGAAATCCAGAGGGCGTAGAAAAGGTCACGTGCGCGCACTTCCTCCTT 1096743 Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979 |||||||||||| ||||||||| | |||| || |||||||||||| ||||| | ||| Sbjct 1096742 GCCGTGGTTCTTGCGCAGGTCGAGGAACTCGAAGACGTCGGCGTGCCAGGGCTCGATGTA 1096683 Query 2071980 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 | |||||||| || ||||||| ||||| Sbjct 1096682 GATAGCAAAGGCACCGGGGCGCTTGTTACCGCC 1096650 Score = 102 bits (112), Expect = 1e-15 Identities = 151/208 (73%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 2070039 CGACGCCGTCGC-CGCCGCATGGTAGATCGTCTCAAAGATGGTGCGGTTGAGGCGACGCG 2070097 ||||||| ||| ||| || |||||||| ||||| ||||| |||||| || |||| | Sbjct 1097463 CGACGCC-TCGAGCGCAGCGTGGTAGATAGTCTCGAAGATATCGCGGTTAAGCTGACGAG 1097405 Query 2070098 CGCCGGCGCTCTCCCACGGCAGGTCCATCATGGCA--AACGCGTCGGCCAGGCCCTGCAC 2070155 | ||| || |||||| | | | | | || ||||||||||| || |||||||| Sbjct 1097404 CTTCGGGCGAGTCGAACGGCATG-CGAAGA-GCCATAAACGCGTCGGCGAGACCCTGCAC 1097347 Query 2070156 GCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTG 2070215 || ||||| || || ||||| |||| || || | || ||||| ||||| || |||| Sbjct 1097346 ACCAACGCCGATAGGACGGTGACGCATATTAGACCGACGAGCCTCAGGCACGGGATAGTA 1097287 Query 2070216 GTTGATGTCGATCACGCGGTTGAGGTTG 2070243 ||||| ||||| | ||||| |||||| Sbjct 1097286 GTTGACATCGATGATTCGGTTCAGGTTG 1097259 Score = 86.0 bits (94), Expect = 1e-10 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 2073658 CCGATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCC 2073717 || || || || || | |||||| || | ||||| | || || || || ||||||||| Sbjct 1096484 CCAATACCACCAGCGGTCTTGGAAATCATTGCGCATGTCTTGAGGGTATCATAGATGCCC 1096425 Query 2073718 TCGATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTG 2073777 ||||| |||| |||||||| | | ||| || || || ||| || || | | |||| Sbjct 1096424 TCGATACTGTCGTCCTTCATGGCAACCAGGAAACAGGAAGAGAGCTGAGGATGGGGCGTG 1096365 Query 2073778 CCGGCATTGAAGAGCGTGGG 2073797 ||||||||||||||||| || Sbjct 1096364 CCGGCATTGAAGAGCGTCGG 1096345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916235868918461