Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq3 132 9e-26 seq14 129 1e-24 >seq3 Length=1694370 Score = 132 bits (146), Expect = 9e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || || || || ||||| ||||| || ||||| ||| | | ||| Sbjct 422998 ACGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGACC 423057 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || || || || ||||||||||| || | ||| || || ||||| || |||||||| Sbjct 423058 GTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGGATGCCTTCCTT 423117 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || || || ||||| || || || || || || || | || || || | || || Sbjct 423118 GTCCTGGATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACCTCGAGGGTGAT 423177 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||||||| ||||| ||||| |||||||| Sbjct 423178 GGTCTTGCCTGTCAGAGTCTTGACAAAGATCTGCAT 423213 >seq14 Length=1069518 Score = 129 bits (142), Expect = 1e-24 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | |||||| || | || || ||||| || ||||| ||||| || || | Sbjct 1023975 TACCACCACGGAGACGCAGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGG 1023916 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | |||||| || || || || || || ||||| || | || ||||| |||| Sbjct 1023915 AAAGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAG 1023856 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || || ||||| || |||||||| || || || || ||||| ||||| | ||| | Sbjct 1023855 GGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGA 1023796 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 |||| | || || ||||| || ||||||||||| || || || ||||| Sbjct 1023795 CTTCGAGCGTGATGGTCTTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747 Score = 120 bits (132), Expect = 6e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| ||||| ||||| || || ||||| ||||| || || || || || || | | || Sbjct 1023506 ACGAAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 1023447 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || ||||| ||||| || | || || || ||||| || || ||||| Sbjct 1023446 ATCCTCAAGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTT 1023387 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || |||||||| || || || || || || || || | | || || || | ||| || Sbjct 1023386 GTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGACTCGACCTCAAGAGTGAT 1023327 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||| |||| ||||| || || |||||||| Sbjct 1023326 CGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291 Score = 114 bits (126), Expect = 3e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | |||||| || || || ||||| || || || || ||| | | || Sbjct 1024190 ACGAAGGACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCC 1024131 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || || || || ||||| ||||| || | || || || ||||| || || ||||| Sbjct 1024130 ATCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTT 1024071 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || || ||||| || || ||||| || || || || | | || ||||| | ||| || Sbjct 1024070 GTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGACTCGACTTCGAGAGTGAT 1024011 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||| ||||| ||||| || || |||||||| Sbjct 1024010 CGTCTTGCCAGTCAAAGTCTTCACGAAAATCTGCAT 1023975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981825954613561