Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1 147 3e-29 seq6 95.1 2e-13 >seq1 Length=2114445 Score = 147 bits (162), Expect = 3e-29 Identities = 192/262 (73%), Gaps = 3/262 (1%) Strand=Plus/Plus Query 1456015 GAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTC 1456074 || ||||||||||| || || ||||| |||||||| ||||| ||| ||||||| | | Sbjct 847327 GAGAACATCCACTCAGAGACATACTCTCTCCTGATTGACACATACATCAAGGATGCCGAA 847386 Query 1456075 GAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGAC 1456134 || || | ||||| ||||| || || | || | | | | ||||||||| Sbjct 847387 CAGCGTGAATATCTCTTCGATGCCATTGATACCATTCCATGCATTAAGCGCAAGGCCGAC 847446 Query 1456135 TGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCT 1456194 ||||| |||| |||||| | || | ||||| |||||| || || ||||||| || Sbjct 847447 TGGGCATTGAAATGGATCTCGGACAAGCGT-TCGAC-CTTTGCTGAACGTCTCGTCGCCT 847504 Query 1456195 TTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGA 1456253 | ||||| || ||||||||||| ||||| ||| ||| |||||||| ||| | |||| Sbjct 847505 TCGCCGCTGTGGAGGGCATCTTCTTCTCCGGCTCCTTCGCTGCCATCTTCTGGATGAAGA 847564 Query 1456254 AGCGCGGCCTCATGCCCGGTCT 1456275 ||||||| |||||||||||||| Sbjct 847565 AGCGCGGTCTCATGCCCGGTCT 847586 Score = 89.7 bits (98), Expect = 7e-12 Identities = 147/205 (72%), Gaps = 8/205 (4%) Strand=Plus/Plus Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630 || || || |||||||||||||||||| | | | || ||| ||||||||| | | || | Sbjct 847744 CTTCCTGTCGCGCTCATCGGCATGAACTCGAAC-CTAATGAACCAGTACATAG-AGTTCG 847801 Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACG--GCCAACC 1456688 ||||||| ||||| || | || |||||| | |||||| ||| ||| | |||| Sbjct 847802 TCGCCGATCGCCTTCTTGTCGCTCTCGGCAAC-GAGAAGGTCTA--TAACGTCACGAACC 847858 Query 1456689 CGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG 1456748 | ||| | ||||| | ||||| || |||| ||||| ||||| |||||| || | Sbjct 847859 CCTTCGACTTCATGGACCTCATCTCCCTTCAGGGAAAGACAAACTTCTTCGAGAAACGAG 847918 Query 1456749 TGGC-GAGTACGCCAAGGCCGGCGT 1456772 | | || || ||||||||||| || Sbjct 847919 TATCGGACTATGCCAAGGCCGGTGT 847943 >seq6 Length=1460661 Score = 95.1 bits (104), Expect = 2e-13 Identities = 153/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 261788 GGCGGCGGCAAGCGCAAGGGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTC 261847 ||||| ||||||| || |||||||| |||| | || || |||||||||||| || Sbjct 1096650 GGCGGTAACAAGCGCCCCGGTGCCTTTGCTATCTACATCGAGCCCTGGCACGCCGACGTC 1096709 Query 261848 ATCAACTGGCTGGACCTCAAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGC 261907 || | | || ||||| |||||||||||||| |||| ||| | |||| || Sbjct 1096710 TTCGAGTTCCTCGACCTGCGCAAGAACCACGGCAA-GGAG-----GAAGTGCGCGCACGT 1096763 Query 261908 GATCTCTTTTACGGCCTGTGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGC 261967 || || || |||| ||| |||| | || ||||| ||| ||| | | | ||| | | Sbjct 1096764 GACCTTTTCTACGCCCTCTGGATTTCAGATCTGTTCATGAAGCGCGTCGAGTCCGACGGT 1096823 Query 261968 GACTGGTCGCTCTTTTGCCCGTCCGAGGCGCCCGGCCTG 262006 |||||||| ||||| ||||| || ||||| ||| || Sbjct 1096824 GACTGGTCTCTCTTCTGCCCTAATGAAGCGCCTGGCATG 1096862 Score = 91.5 bits (100), Expect = 2e-12 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 259925 CCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTTGGAC 259984 || |||||||| |||||||||||||| | || ||| || || || || ||| | | | Sbjct 1096345 CCGACGCTCTTCAATGCCGGCACGCCCCATCCTCAGCTCTCTTCCTGTTTCCTGGTTGCC 1096404 Query 259985 ATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCATCTCC 260044 ||||||| ||| ||||||||||||||||| || |||||| ||||| | || ||| Sbjct 1096405 ATGAAGGACGACAGTATCGAGGGCATCTATGATACCCTCAAGACATGCGCAATGATTTCC 1096464 Query 260045 AAGGCGGCCGGCGGCATCGG 260064 ||| | || || || || || Sbjct 1096465 AAGACCGCTGGTGGTATTGG 1096484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177801651268038