Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq14 149 6e-31 seq3 113 5e-20 seq7 93.3 4e-14 seq1 89.7 5e-13 seq5 82.4 8e-11 >seq14 Length=1069518 Score = 149 bits (164), Expect = 6e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| |||||| || || || || ||||| || || ||||||||| | Sbjct 1023973 CCACCACGGAGACGCAGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAA 1023914 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| || ||| |||||||| ||||| || || |||| |||||||||||||| || Sbjct 1023913 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGG 1023854 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||| || ||||| || | || || |||||||| || Sbjct 1023853 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGACT 1023794 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || ||||| || || || || || || ||||| |||||||| Sbjct 1023793 TCGAGCGTGATGGTCTTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747 Score = 122 bits (134), Expect = 9e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || ||||| |||||||| ||||| || ||||||||||||| Sbjct 1024201 CCACCACGGAGACGAAGGACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTC 1024142 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| || || || | ||||||||| ||||| || Sbjct 1024141 AGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGG 1024082 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || || || || || || ||| | |||||| || || || Sbjct 1024081 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGACTCGACT 1024022 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| || || || || || ||||| || |||||||| ||||| Sbjct 1024021 TCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAAATCTGCAT 1023975 Score = 120 bits (132), Expect = 3e-22 Identities = 165/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| ||||| ||||| || ||||| |||||||||||||| | Sbjct 1023745 CCACCGCGGAGACGAAGCACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTC--CG 1023688 Query 134547 ACGGTGTGAGA--GTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||||| || ||| || ||||| ||||| || || || | |||||||||||| || | Sbjct 1023687 AGAGTGTGCGACCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGG 1023628 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || || || || || ||||| || | ||||| || || || | Sbjct 1023627 GAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAA 1023568 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| || ||||| || ||||| | || || || || || ||||| Sbjct 1023567 CCTCGAGTGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 1023519 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | || | ||| || ||||||||||| || |||||||||||| Sbjct 1023517 CCACCACGGAGACGAAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAG 1023458 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| || || || || || | |||||||| || || || Sbjct 1023457 AGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGA 1023398 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || || || || ||||| || ||||| || | |||||| ||| || || Sbjct 1023397 ATACCCTCCTTGTCCTGAATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGACTCGACC 1023338 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| || || || ||||| | ||| || ||||| || ||||| Sbjct 1023337 TCAAGAGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291 >seq3 Length=1694370 Score = 113 bits (124), Expect = 5e-20 Identities = 166/235 (71%), Gaps = 0/235 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||| || | ||| ||||| || ||||||||||| || || ||||| || Sbjct 423494 TTCCACCACGGAGACGAAGCACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCG 423553 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | ||| | ||| || ||||| ||||| || || |||| | |||||| || || | Sbjct 423554 ACAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAG 423613 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || || || || || |||||| ||| | ||||| || || || | Sbjct 423614 GGATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGA 423673 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTT 134719 | ||||| || ||||| || || || | ||| || ||||| || ||||| |||| Sbjct 423674 CCTCGAGTGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCATGCTGTT 423728 >seq7 Length=1357966 Score = 93.3 bits (102), Expect = 4e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 ||||| | || || | |||||||| || |||||||||||||| |||||||||||| Sbjct 1033448 CCTCCACGCAGACGGAGGACGAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGAG 1033389 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | ||| |||||||| ||||| || || |||| || ||||| |||||||| Sbjct 1033388 AGTGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGCGGG 1033329 Query 134607 ATGC 134610 |||| Sbjct 1033328 ATGC 1033325 >seq1 Length=2114445 Score = 89.7 bits (98), Expect = 5e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 21718 AGACAAGCAAAATTGGTGTGCAATCCCTCGTCGCGCGAAATCAATTCGTTGCTGAACGTG 21777 || || ||||| | |||||||| ||||| ||||| || || | |||||| ||| || Sbjct 847646 AGGCATGCAAAGTCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAATGTC 847587 Query 21778 AGACCGGGCATTAAACCTCGATTTTTAATGTAAAAAATTGCCGCAAAGCTACCGGaaaaa 21837 ||||||||||| | ||| || || || || | || || || || ||| ||||| || Sbjct 847586 AGACCGGGCATGAGACCGCGCTTCTTCATCCAGAAGATGGCAGCGAAGGAGCCGGAGAAG 847527 Query 21838 aaCACGCCCTCCACAATGGCGAACGCCAC 21866 || | |||||||||| |||||| || || Sbjct 847526 AAGATGCCCTCCACAGCGGCGAAGGCGAC 847498 >seq5 Length=1492030 Score = 82.4 bits (90), Expect = 8e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || ||||| ||||| || || ||||||||||| || ||||||||||| | |||| | Sbjct 1092195 AGACGCAAGACGAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGG 1092254 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTAT 134608 || || ||||| ||||||||||| |||| || |||||||| || || || Sbjct 1092255 CCATCCTCCAGCTGCTTGCCTGCAAAGATCAGGCGTTGCTGATCAGGAGGGAT 1092307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505397774569480