Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq14 114 1e-20 >seq14 Length=1069518 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || ||||| |||||||| | |||| ||||||| ||||| || || Sbjct 1023716 CGTTGACTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGACCGTCTTCCAGCTGCTTGCC 1023657 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 |||| | ||||||||||| ||||| || || | ||||| ||||| ||||||| || Sbjct 1023656 GGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTT 1023597 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 | | | || | |||||| | | ||||| || || || || | ||||| ||||| || Sbjct 1023596 GACGTTATCGATAGTGTCCGATGACTCAACCTCGAGTGTGATGGTCTTGCCGGTCAGGGT 1023537 Query 27230 TTTCACAAAGATTTGCAT 27247 ||||||||||| ||||| Sbjct 1023536 CTTCACAAAGATCTGCAT 1023519 Score = 102 bits (112), Expect = 7e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 27050 CGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACC 27109 ||| || || || || || ||||||||||||| |||| | || |||||||| || || Sbjct 1024172 CGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCGAGCTGCTTGCC 1024113 Query 27110 GGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTT 27169 ||| | || |||||||| || || || || | |||||| || || |||||| || Sbjct 1024112 AGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCCTGGATCTTCGCCTT 1024053 Query 27170 CAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGT 27229 || | || | ||||| ||| || ||||| ||||| || | ||||| |||| ||| Sbjct 1024052 CACATTGTCGATGGTGTCGCTGGACTCGACTTCGAGAGTGATCGTCTTGCCAGTCAAAGT 1023993 Query 27230 TTTCACAAAGATTTGCATA 27248 ||||| || || |||||| Sbjct 1023992 CTTCACGAAAATCTGCATA 1023974 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCG 27092 |||| || | ||| | ||||| || || || |||||||||||| | | |||| || Sbjct 1023961 CGCAGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCG 1023902 Query 27093 TCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTA 27152 || |||||||| || |||||| | || || ||||| ||||| || || | ||||| || Sbjct 1023901 TCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTG 1023842 Query 27153 TCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATA 27212 || |||||| || | | | || | || || | | ||| ||||| || || || Sbjct 1023841 TCCTGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGACTTCGAGCGTGATG 1023782 Query 27213 GATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || ||||||| || || || |||||||||||| Sbjct 1023781 GTCTTTCCCGTCAACGTCTTGACGAAGATTTGCATA 1023746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933887290088