Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1 120 4e-22 seq4 86.0 8e-12 >seq1 Length=2114445 Score = 120 bits (132), Expect = 4e-22 Identities = 199/286 (70%), Gaps = 6/286 (2%) Strand=Plus/Minus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | |||||||| ||||| || || || || ||||| ||||| Sbjct 847640 GCAAAGTCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCG 847581 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||||||||| |||||||||| ||| | || || ||| || |||||||||||||| Sbjct 847580 GGCATGAGACCGCGCTTCTTCATCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATG 847521 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAAC 122838 ||||||||| || || || | || ||||| || |||| | ||| | | | Sbjct 847520 CCCTCCACAGCGGCGAAGGCGACGAGACGTTCAGCAAAGGTCGAACGCTTGTCCGAGATC 847461 Query 122839 CATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAAT 122898 ||||||| |||||| | ||||| || ||| ||||| | || | ||||| || || Sbjct 847460 CATTTCAATGCCCAGTCGGCCTTGCGCTTAATGCATGGAATGGTATCAATGGCATCGAAG 847401 Query 122899 A---ACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCA 122941 | | | || ||| | ||||||| |||||| ||||||||| Sbjct 847400 AGATATTCACGCTGTTCGG---CATCCTTGATGTATGTGTCAATCA 847358 >seq4 Length=1638504 Score = 86.0 bits (94), Expect = 8e-12 Identities = 116/159 (73%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 170019 CCGAAATCGCAAAGCATAACAGCGAACAAGATTGTTGGGTCATAATCAA-GGACATTGTT 170077 ||||| |||| ||||| |||| || | || || ||||| || ||||| || || || Sbjct 260396 CCGAAGTCGCCAAGCACAACAAGAAAGACGACTGCTGGGTGATCATCAACGGGCAA-GTA 260454 Query 170078 TATGACCTCACAAAATTCCTTCCAGATCACCCCGGTGGTAAGAAGGCGATCATGCTCTTT 170137 |||| | || || ||||| || || || || ||||| ||||||||||| |||||| | Sbjct 260455 CTTGACGTGACTAAGTTCCTCCCTGACCATCCTGGTGGAGAGAAGGCGATCTTGCTCTAT 260514 Query 170138 GCTGGCAAAGATGCAACTGAAGAGTTTGATATGCTTCAT 170176 || || | || || || || ||||| | ||||||||| Sbjct 260515 GCCGGGAGGGACGCGACGGAGGAGTTCAACATGCTTCAT 260553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031222810400