Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1 120 4e-22
seq4 86.0 8e-12
>seq1
Length=2114445
Score = 120 bits (132), Expect = 4e-22
Identities = 199/286 (70%), Gaps = 6/286 (2%)
Strand=Plus/Minus
Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718
||||| || ||| | |||||||| ||||| || || || || ||||| |||||
Sbjct 847640 GCAAAGTCGGTGTGCATGCCCTCATCGCGGGAGATGAGCTCGTTGGAGAATGTCAGACCG 847581
Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778
||||||||||| |||||||||| ||| | || || ||| || ||||||||||||||
Sbjct 847580 GGCATGAGACCGCGCTTCTTCATCCAGAAGATGGCAGCGAAGGAGCCGGAGAAGAAGATG 847521
Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAAC 122838
||||||||| || || || | || ||||| || |||| | ||| | | |
Sbjct 847520 CCCTCCACAGCGGCGAAGGCGACGAGACGTTCAGCAAAGGTCGAACGCTTGTCCGAGATC 847461
Query 122839 CATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAAT 122898
||||||| |||||| | ||||| || ||| ||||| | || | ||||| || ||
Sbjct 847460 CATTTCAATGCCCAGTCGGCCTTGCGCTTAATGCATGGAATGGTATCAATGGCATCGAAG 847401
Query 122899 A---ACTGCTTCTTTTCAGATCCATCCTTAATGTATTTGTCAATCA 122941
| | | || ||| | ||||||| |||||| |||||||||
Sbjct 847400 AGATATTCACGCTGTTCGG---CATCCTTGATGTATGTGTCAATCA 847358
>seq4
Length=1638504
Score = 86.0 bits (94), Expect = 8e-12
Identities = 116/159 (73%), Gaps = 2/159 (1%)
Strand=Plus/Plus
Query 170019 CCGAAATCGCAAAGCATAACAGCGAACAAGATTGTTGGGTCATAATCAA-GGACATTGTT 170077
||||| |||| ||||| |||| || | || || ||||| || ||||| || || ||
Sbjct 260396 CCGAAGTCGCCAAGCACAACAAGAAAGACGACTGCTGGGTGATCATCAACGGGCAA-GTA 260454
Query 170078 TATGACCTCACAAAATTCCTTCCAGATCACCCCGGTGGTAAGAAGGCGATCATGCTCTTT 170137
|||| | || || ||||| || || || || ||||| ||||||||||| |||||| |
Sbjct 260455 CTTGACGTGACTAAGTTCCTCCCTGACCATCCTGGTGGAGAGAAGGCGATCTTGCTCTAT 260514
Query 170138 GCTGGCAAAGATGCAACTGAAGAGTTTGATATGCTTCAT 170176
|| || | || || || || ||||| | |||||||||
Sbjct 260515 GCCGGGAGGGACGCGACGGAGGAGTTCAACATGCTTCAT 260553
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031222810400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |