Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq6 111 2e-19 seq1 104 3e-17 seq13 86.0 7e-12 >seq6 Length=1460661 Score = 111 bits (122), Expect = 2e-19 Identities = 520/812 (64%), Gaps = 34/812 (4%) Strand=Plus/Plus Query 55139 AACCTGAACCGGGTCATCGACAAGAATTACTACCC---GACTGAAGCGGCGCGCAAGTCC 55195 ||||||||||| ||||||| || ||||| || | |||| ||| || ||| Sbjct 1097260 AACCTGAACCGAATCATCGATGTCAACTACTATCCCGTGCCTGA---GGCTCGTCGGTCT 1097316 Query 55196 AACCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATG 55255 || | || ||||| || |||| | | ||||| ||||| | |||||| || ||| Sbjct 1097317 AATATGCGTCACCGTCCTATCGGCGTTGGTGTGCAGGGTCTCGCCGACGCGTTTATGGCT 1097376 Query 55256 CTCGGATTGCCCTTCGACTCG---GAACCTGCTCGAGAAATTAACCAGGACATCTTC-AG 55311 || | |||| ||||||||| ||| ||||| | |||||| || |||||| || Sbjct 1097377 CTTCGCATGCCGTTCGACTCGCCCGAA---GCTCGTCAGCTTAACCGCGATATCTTCGAG 1097433 Query 55312 TCGCATCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTA 55371 | |||||| || |||||||||| |||| | |||| || || || | || Sbjct 1097434 ACT-ATCTACCACGCTGCGCTCGAGGCGTCGAACGAGATGGCCGAGACGGACGGCGCGTA 1097492 Query 55372 CGAGACGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGGCAA 55431 |||||||||| | || || ||| | ||| |||||||| || ||||||||| Sbjct 1097493 CGAGACGTTCGAAGGCTCCCCTGCTTCCCGTGGAGAGCTCCAGTTTGACCTATGGGGCGT 1097552 Query 55432 G------TCTGACCCCATG---TTTGACAAGTTGAAGCATGACATTCACTTGTGGGGCCT 55482 | || |||| | | | | | | ||||| | | || | ||| || Sbjct 1097553 GATGCCTTCCGACCGCTGGGACTGGGCCGGGCTGAAGGAGAAGATCAGCCGCACGGGTCT 1097612 Query 55483 ACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAA 55542 ||||||||||| ||| | || || ||||| ||||| || || | |||||| |||| || Sbjct 1097613 GCGCAACTCCCTCCTCCTTGCCCCTATGCCTACCGCCTCCACTTCCCAGATCCTGGGGAA 1097672 Query 55543 CAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGA 55602 ||||||| ||||||||||| || | | |||||| ||| || || || || || Sbjct 1097673 CAACGAGTGCTTCGAGCCGTATACATCTATGATCTACGCGCGTCGTGTACTCGCCGGCGA 1097732 Query 55603 GTTTGTCATGATCAACAAGCACCT-CGTCAAGGACCTGCAGAAGATCAACAAGTGGAACC 55661 ||| | || | | || | || | | || || || | |||||| Sbjct 1097733 GTTCCAGGTTGTCTGCCCGTGGCTTCTTCGCGATCTTGTCGATC-TCGGCCTATGGAACG 1097791 Query 55662 CGCAGATCAAGACGGATATTGTG--CGGAACGGG-GGGTCCGTCCAGAA--TCTGGAGAT 55716 ||||| | |||||| | || | || ||||| ||||||| || || Sbjct 1097792 ACCAGAT---GCGGGATATGATCATCGCTTCCGGCGGGTCGATCCAGAACATCCCCGGAA 1097848 Query 55717 TCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGA 55775 ||| | | |||| | ||| ||| ||| || |||||||| ||||||||| | Sbjct 1097849 TCCCGGACAACATCAAAGCGATCTACAAGACCGTCTGGGAGATCTCACAGAAGAAGATCC 1097908 Query 55776 TTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCA 55835 | ||| | || || || ||||||| |||| |||| ||| ||||| || Sbjct 1097909 TCGACCTCGCCGCGGACCGGGGTGCGTTCATCTGCCAGAGTCAGAGCTTGAACGTCCATC 1097968 Query 55836 TGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGAC 55895 | ||| ||| | || | | || | | || ||||| || ||||| ||||||||||| | Sbjct 1097969 TCCAGAGCCCTACTCTCGGCCAGCTCACGTCCATGCATTTCTACGGCTGGAAGAAGGGGC 1098028 Query 55896 TCAAGACGGGTATGTACTATCTGCGGACCCGC 55927 |||||||||| |||||||| || || || ||| Sbjct 1098029 TCAAGACGGGCATGTACTACCTTCGTACGCGC 1098060 Score = 98.7 bits (108), Expect = 1e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551 || ||||| || |||||||| | | | | || || || |||||| |||| || ||| Sbjct 1096596 GGTATCGTCCCCATGCTCCGTGCTTACGATGCTACTGCTCGCTACGTCGACCAAGGCGGT 1096655 Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611 |||||| || | || || |||||| ||||||| |||||||||||| | | ||| Sbjct 1096656 AACAAGCGCCCCGGTGCCTTTGCTATCTACATCGAGCCCTGGCACGCCGACGTCTTCGAG 1096715 Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TAC 53670 || ||||| ||||| ||| || || | || || ||||| |||||||| || ||| Sbjct 1096716 TTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAAGTGCGCGCACGTGACCTTTTCTAC 1096775 Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATG 53698 || || |||||| | || || |||||| Sbjct 1096776 -GCCCTCTGGATTTCAGATCTGTTCATG 1096802 >seq1 Length=2114445 Score = 104 bits (114), Expect = 3e-17 Identities = 179/256 (70%), Gaps = 7/256 (3%) Strand=Plus/Minus Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864 || || ||||| || || |||||||||| ||| ||||||||| |||||| || |||| Sbjct 847586 AGACCGGGCATGAGACCGCGCTTCTTCATCCAGAAGATGGCAGCGAAGGAGCCGGAGAAG 847527 Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC 74924 |||||||| || ||| || |||||||| || |||| || || ||| | || ||| Sbjct 847526 AAGATGCCCTCCACAGCGGCGAAGGCGACGAGACGTTCAGC-AAAGGTCGAACGCTTGTC 847468 Query 74925 ----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCG 74979 ||||| || ||||| || || || || || | ||| || | ||||| || | Sbjct 847467 CGAGATCCATTTCAATGCCCAGTCGGCCTTGCGCTT-AATGCATGGAATGGTATCAATGG 847409 Query 74980 CTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGT 75039 | | |||||| | | || ||||| |||||||| | ||||||||| || |||| Sbjct 847408 CATCGAAGAGATATTCACGCTGTTCGGCATCCTTGATGTATGTGTCAATCAGGAGAGAGT 847349 Query 75040 ACGTCTCCGAATGAAT 75055 | ||||| || || || Sbjct 847348 ATGTCTCTGAGTGGAT 847333 >seq13 Length=1079320 Score = 86.0 bits (94), Expect = 7e-12 Identities = 180/261 (69%), Gaps = 8/261 (3%) Strand=Plus/Minus Query 118045 ATCGGTCATGATCATCAGGCGGCCGTACCGTAAATCTCTC-AGGGAGTTATAAACCTTAC 118103 ||| ||||||||||| | || || || | | | || || | || | ||| |||||| Sbjct 897443 ATCAGTCATGATCATTATGCTACCATATC-TGAGGCTGTCGACAGAATCATACACCTTAT 897385 Query 118104 CATGTTGGAGCCCGAGGATCTTTTTAAGG--TTGGAAAATTCCTCATTTTCCGTCACCTG 118161 ||||||||||| | |||||| || | | ||||| ||| | |||| | | | ||| Sbjct 897384 TGTGTTGGAGCCCCATGATCTTCTTGATGGCTTGGAT--TTCAGCGTTTTTCATGATCTG 897327 Query 118162 TTTTATGGTG-GCGTCCCGAACGTTGCGCGGCTTACCCCGCAGTGGAAACACGCCAAACT 118220 | ||||| || || || || ||| | ||||||| || || ||||| | ||||| | Sbjct 897326 CTC-ATGGTTCGCTTCTCGGACATTGAGAAGCTTACCACGAAGCGGAAAGATACCAAAAT 897268 Query 118221 TGTCACGGCCCACAACGCTCAAGCCGGCAATAGCAAGGGCCTTCGCCGAGTCACCCTCGG 118280 |||||||||||||||| || || || || || | ||| || ||||| || ||| Sbjct 897267 TGTCACGGCCCACAACAGCCAGACCAGCTTCGGCGAGCGTCTTTGCAGAGTCTCCTTCGC 897208 Query 118281 TAATAATAAGAGTGCACTCGG 118301 || ||| |||| |||| || Sbjct 897207 AAAGAATCAGAGAACACTTGG 897187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215322820200