Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq6 111 2e-19
seq1 104 3e-17
seq13 86.0 7e-12
>seq6
Length=1460661
Score = 111 bits (122), Expect = 2e-19
Identities = 520/812 (64%), Gaps = 34/812 (4%)
Strand=Plus/Plus
Query 55139 AACCTGAACCGGGTCATCGACAAGAATTACTACCC---GACTGAAGCGGCGCGCAAGTCC 55195
||||||||||| ||||||| || ||||| || | |||| ||| || |||
Sbjct 1097260 AACCTGAACCGAATCATCGATGTCAACTACTATCCCGTGCCTGA---GGCTCGTCGGTCT 1097316
Query 55196 AACCTCCGGCACCGGCCCATCGCCATCGGTGTACAGGGCTTGGCCGACATCTTCATGATG 55255
|| | || ||||| || |||| | | ||||| ||||| | |||||| || |||
Sbjct 1097317 AATATGCGTCACCGTCCTATCGGCGTTGGTGTGCAGGGTCTCGCCGACGCGTTTATGGCT 1097376
Query 55256 CTCGGATTGCCCTTCGACTCG---GAACCTGCTCGAGAAATTAACCAGGACATCTTC-AG 55311
|| | |||| ||||||||| ||| ||||| | |||||| || |||||| ||
Sbjct 1097377 CTTCGCATGCCGTTCGACTCGCCCGAA---GCTCGTCAGCTTAACCGCGATATCTTCGAG 1097433
Query 55312 TCGCATCTACTTTGCAGCGCTCGAGGAGTCGTGTCATCTGGCTATGAGCGAGGGGACCTA 55371
| |||||| || |||||||||| |||| | |||| || || || | ||
Sbjct 1097434 ACT-ATCTACCACGCTGCGCTCGAGGCGTCGAACGAGATGGCCGAGACGGACGGCGCGTA 1097492
Query 55372 CGAGACGTTCCGTGATTCGCCAGCTGACAAGGGACTTCTCCAGTTCGATCTATGGGGCAA 55431
|||||||||| | || || ||| | ||| |||||||| || |||||||||
Sbjct 1097493 CGAGACGTTCGAAGGCTCCCCTGCTTCCCGTGGAGAGCTCCAGTTTGACCTATGGGGCGT 1097552
Query 55432 G------TCTGACCCCATG---TTTGACAAGTTGAAGCATGACATTCACTTGTGGGGCCT 55482
| || |||| | | | | | | ||||| | | || | ||| ||
Sbjct 1097553 GATGCCTTCCGACCGCTGGGACTGGGCCGGGCTGAAGGAGAAGATCAGCCGCACGGGTCT 1097612
Query 55483 ACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAA 55542
||||||||||| ||| | || || ||||| ||||| || || | |||||| |||| ||
Sbjct 1097613 GCGCAACTCCCTCCTCCTTGCCCCTATGCCTACCGCCTCCACTTCCCAGATCCTGGGGAA 1097672
Query 55543 CAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGA 55602
||||||| ||||||||||| || | | |||||| ||| || || || || ||
Sbjct 1097673 CAACGAGTGCTTCGAGCCGTATACATCTATGATCTACGCGCGTCGTGTACTCGCCGGCGA 1097732
Query 55603 GTTTGTCATGATCAACAAGCACCT-CGTCAAGGACCTGCAGAAGATCAACAAGTGGAACC 55661
||| | || | | || | || | | || || || | ||||||
Sbjct 1097733 GTTCCAGGTTGTCTGCCCGTGGCTTCTTCGCGATCTTGTCGATC-TCGGCCTATGGAACG 1097791
Query 55662 CGCAGATCAAGACGGATATTGTG--CGGAACGGG-GGGTCCGTCCAGAA--TCTGGAGAT 55716
||||| | |||||| | || | || ||||| ||||||| || ||
Sbjct 1097792 ACCAGAT---GCGGGATATGATCATCGCTTCCGGCGGGTCGATCCAGAACATCCCCGGAA 1097848
Query 55717 TCCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGA 55775
||| | | |||| | ||| ||| ||| || |||||||| ||||||||| |
Sbjct 1097849 TCCCGGACAACATCAAAGCGATCTACAAGACCGTCTGGGAGATCTCACAGAAGAAGATCC 1097908
Query 55776 TTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCA 55835
| ||| | || || || ||||||| |||| |||| ||| ||||| ||
Sbjct 1097909 TCGACCTCGCCGCGGACCGGGGTGCGTTCATCTGCCAGAGTCAGAGCTTGAACGTCCATC 1097968
Query 55836 TGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGAC 55895
| ||| ||| | || | | || | | || ||||| || ||||| ||||||||||| |
Sbjct 1097969 TCCAGAGCCCTACTCTCGGCCAGCTCACGTCCATGCATTTCTACGGCTGGAAGAAGGGGC 1098028
Query 55896 TCAAGACGGGTATGTACTATCTGCGGACCCGC 55927
|||||||||| |||||||| || || || |||
Sbjct 1098029 TCAAGACGGGCATGTACTACCTTCGTACGCGC 1098060
Score = 98.7 bits (108), Expect = 1e-15
Identities = 148/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 53492 GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGGT 53551
|| ||||| || |||||||| | | | | || || || |||||| |||| || |||
Sbjct 1096596 GGTATCGTCCCCATGCTCCGTGCTTACGATGCTACTGCTCGCTACGTCGACCAAGGCGGT 1096655
Query 53552 GGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAG 53611
|||||| || | || || |||||| ||||||| |||||||||||| | | |||
Sbjct 1096656 AACAAGCGCCCCGGTGCCTTTGCTATCTACATCGAGCCCTGGCACGCCGACGTCTTCGAG 1096715
Query 53612 TTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TAC 53670
|| ||||| ||||| ||| || || | || || ||||| |||||||| || |||
Sbjct 1096716 TTCCTCGACCTGCGCAAGAACCACGGCAAGGAGGAAGTGCGCGCACGTGACCTTTTCTAC 1096775
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATG 53698
|| || |||||| | || || ||||||
Sbjct 1096776 -GCCCTCTGGATTTCAGATCTGTTCATG 1096802
>seq1
Length=2114445
Score = 104 bits (114), Expect = 3e-17
Identities = 179/256 (70%), Gaps = 7/256 (3%)
Strand=Plus/Minus
Query 74805 AGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAG 74864
|| || ||||| || || |||||||||| ||| ||||||||| |||||| || ||||
Sbjct 847586 AGACCGGGCATGAGACCGCGCTTCTTCATCCAGAAGATGGCAGCGAAGGAGCCGGAGAAG 847527
Query 74865 AAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC 74924
|||||||| || ||| || |||||||| || |||| || || ||| | || |||
Sbjct 847526 AAGATGCCCTCCACAGCGGCGAAGGCGACGAGACGTTCAGC-AAAGGTCGAACGCTTGTC 847468
Query 74925 ----ATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGCA-GGGACAGTATCGATCG 74979
||||| || ||||| || || || || || | ||| || | ||||| || |
Sbjct 847467 CGAGATCCATTTCAATGCCCAGTCGGCCTTGCGCTT-AATGCATGGAATGGTATCAATGG 847409
Query 74980 CTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGT 75039
| | |||||| | | || ||||| |||||||| | ||||||||| || ||||
Sbjct 847408 CATCGAAGAGATATTCACGCTGTTCGGCATCCTTGATGTATGTGTCAATCAGGAGAGAGT 847349
Query 75040 ACGTCTCCGAATGAAT 75055
| ||||| || || ||
Sbjct 847348 ATGTCTCTGAGTGGAT 847333
>seq13
Length=1079320
Score = 86.0 bits (94), Expect = 7e-12
Identities = 180/261 (69%), Gaps = 8/261 (3%)
Strand=Plus/Minus
Query 118045 ATCGGTCATGATCATCAGGCGGCCGTACCGTAAATCTCTC-AGGGAGTTATAAACCTTAC 118103
||| ||||||||||| | || || || | | | || || | || | ||| ||||||
Sbjct 897443 ATCAGTCATGATCATTATGCTACCATATC-TGAGGCTGTCGACAGAATCATACACCTTAT 897385
Query 118104 CATGTTGGAGCCCGAGGATCTTTTTAAGG--TTGGAAAATTCCTCATTTTCCGTCACCTG 118161
||||||||||| | |||||| || | | ||||| ||| | |||| | | | |||
Sbjct 897384 TGTGTTGGAGCCCCATGATCTTCTTGATGGCTTGGAT--TTCAGCGTTTTTCATGATCTG 897327
Query 118162 TTTTATGGTG-GCGTCCCGAACGTTGCGCGGCTTACCCCGCAGTGGAAACACGCCAAACT 118220
| ||||| || || || || ||| | ||||||| || || ||||| | ||||| |
Sbjct 897326 CTC-ATGGTTCGCTTCTCGGACATTGAGAAGCTTACCACGAAGCGGAAAGATACCAAAAT 897268
Query 118221 TGTCACGGCCCACAACGCTCAAGCCGGCAATAGCAAGGGCCTTCGCCGAGTCACCCTCGG 118280
|||||||||||||||| || || || || || | ||| || ||||| || |||
Sbjct 897267 TGTCACGGCCCACAACAGCCAGACCAGCTTCGGCGAGCGTCTTTGCAGAGTCTCCTTCGC 897208
Query 118281 TAATAATAAGAGTGCACTCGG 118301
|| ||| |||| |||| ||
Sbjct 897207 AAAGAATCAGAGAACACTTGG 897187
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215322820200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |