Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq14 188 8e-43 seq3 170 2e-37 seq6 150 2e-31 seq5 107 2e-18 seq1 100 3e-16 >seq14 Length=1069518 Score = 188 bits (208), Expect = 8e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || ||||||||||| ||||| | Sbjct 1023291 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACTCTTGAGGTCGAGTCGAGC 1023350 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || ||||||||||||||||| |||||||| |||||| Sbjct 1023351 GACACTATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 1023410 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || ||||| ||||| || ||||||| || ||||| | ||||| || Sbjct 1023411 CAGCGCCTTATCTTCGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 1023470 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| ||||| | || | ||||| || ||||| Sbjct 1023471 ATCCAGAAGGAATCCACCCTTCACTTGGTTCTTCGTCTCCGTGGTGG 1023517 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| ||||||||| | || || ||||| || || || || || || || Sbjct 1023747 ATGCAAATCTTCGTCAAGACGTTGACGGGAAAGACCATCACGCTCGAAGTCGAATCGTCG 1023806 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || | ||||| || ||||||||||||||||| || ||||| || ||| Sbjct 1023807 GATACCATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGATCAG 1023866 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||| | ||| ||||| | ||||| ||| Sbjct 1023867 CAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCCGACTACAAT 1023926 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || |||||||| || ||||||| || ||||| Sbjct 1023927 ATCCAGAAGGAGTCTACCCTTCATCTCGTGCTGCGTCTCCGTGGTGG 1023973 Score = 170 bits (188), Expect = 2e-37 Identities = 178/231 (77%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || ||||| | || |||||||| || ||||| || || ||||| | Sbjct 1023975 ATGCAGATTTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAAGTCGAGTCCAGC 1024034 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| ||||||| || || |||||||||||||| || ||||| |||||| Sbjct 1024035 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAG 1024094 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||||| || || ||||| ||||| |||||||||| || || || ||| ||||| || Sbjct 1024095 CAGCGTCTTATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGC-GACTACAA 1024153 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| ||||| || || || ||| | ||||| || ||||| || Sbjct 1024154 CATCCAGAAGGAGTCCACGCTGCACCTTGTCCTTCGTCTCCGTGGTGGGCA 1024204 Score = 152 bits (168), Expect = 6e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| ||||| || ||||||||||| || || || |||||||||||| Sbjct 1023519 ATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACACTCGAGGTTGAGTCATCG 1023578 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || || ||||| |||||||| ||||| || || ||| Sbjct 1023579 GACACTATCGATAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCTGATCAG 1023638 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| || || || | ||| || || | ||||| || Sbjct 1023639 CAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGTCGCACACTCTCGGACTACAAC 1023698 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || || ||||| || || | ||||| |||||||| Sbjct 1023699 ATTCAGAAGGAGTCAACGCTTCACCTTGTGCTTCGTCTCCGCGGTGG 1023745 Score = 86.0 bits (94), Expect = 7e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 ||||| || ||||||||||| || || || ||||| || || || ||||||| || ||| Sbjct 1023168 ATTCCCCCCGACCAGCAGCGCCTGATCTTCGCTGGCAAACAGCTTGAGGATGGCCGCACC 1023227 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 || | || || || |||| ||||| || || || || || ||| | |||||||| ||| Sbjct 1023228 CTGTCGGATTACAACATCCAGAAGGAGTCGACGCTCCACCTCGTCCTCCGTCTTCGTGGT 1023287 Query 27631 GG 27632 || Sbjct 1023288 GG 1023289 >seq3 Length=1694370 Score = 170 bits (188), Expect = 2e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || || |||||||| || || || ||||| |||||| Sbjct 423213 ATGCAGATCTTTGTCAAGACTCTGACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCG 423154 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| ||||| ||||||||||| || || ||||| |||||| Sbjct 423153 GACACCATCGACAACGTCAAGGCAAAAATCCAGGACAAGGAAGGCATCCCTCCCGACCAG 423094 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || |||||||| ||||| |||||||| | ||| || || | ||||| ||| Sbjct 423093 CAACGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCTGACTACAAT 423034 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || ||||| || || | ||||| || || || Sbjct 423033 ATCCAGAAGGAGTCGACGCTTCACCTGGTGCTCCGTCTCCGTGGCGG 422987 Score = 159 bits (176), Expect = 4e-34 Identities = 172/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| || || || ||||| ||||| Sbjct 423722 ATGCAGATCTTCGTCAAGACTCTCACTGGCAAGACCATCACACTCGAGGTCGAGTCCTCG 423663 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | || || || || |||||||||||||| || ||||| |||||| Sbjct 423662 GACACGATCGACAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCTGACCAG 423603 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | || || || ||||| ||||| || ||||| | |||||||| | || || ||| Sbjct 423602 CAGAGGCTGATCTTCGCTGGCAAGCAGCTTGAGGACGGCCGTACCCTGTCGGATTACAAT 423543 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 |||| ||||||||||| ||||| || || | ||||| || |||||| Sbjct 423542 ATCCAGAAGGAATCCACCCTTCACCTGGTGCTTCGTCTCCGTGGTGGA 423495 >seq6 Length=1460661 Score = 150 bits (166), Expect = 2e-31 Identities = 303/447 (68%), Gaps = 2/447 (0%) Strand=Plus/Minus Query 80569 GACGCCGGAGACCCCGCGAACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACACGAC 80628 || || || || || ||||||||||||||| ||| ||||||| ||||| ||| |||| Sbjct 1097519 GAAGCAGGGGAGCCTTCGAACGTCTCGTACGCGCCGTCCGTCTCGGCCATCTCGTTCGAC 1097460 Query 80629 TCCATAAGGGCCGCGTGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGT 80688 || || || ||||| || || ||| |||| | ||| | || || | Sbjct 1097459 GCCTCGAGCGCAGCGTGGTAGATAGTCTCGAAGATATCGCGGTTAAGCTGACGAGCTTCG 1097400 Query 80689 GGGTCGTCGAACGACAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATG 80748 || |||||||| || || | ||| ||| |||| || || ||||| || || | | Sbjct 1097399 GGCGAGTCGAACGGCATGCGAAGAGCCATAAACGCGTCGGCGAGACCCTGCACACCAACG 1097340 Query 80749 GCGATCGGGCGGTGGCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTA 80808 |||| || ||||| ||| | || || || ||||| || | || || |||| | Sbjct 1097339 CCGATAGGACGGTGACGCATATTAGACCGACGAGCCTCAGGCACGGGATAGTAGTTGACA 1097280 Query 80809 TCGATGACGCGGTTCAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAG 80868 ||||||| |||||||||||| | || ||| | || | || || |||| ||| Sbjct 1097279 TCGATGATTCGGTTCAGGTTGAACGCGACCACCTTGGCGACCGCGTGCAGCTTCTCGAAG 1097220 Query 80869 TCGAATTGGTTCCCCTTCACAAATGCCGG-AAGGCTCAGGGACGCCAGATTGCACACGGC 80927 ||| | || ||| | || | || ||||| | ||| || |||||||| ||||| Sbjct 1097219 TCGTACTGACCGTCCTGGATGAAGGAAGGCAAGGC-AATGGAGGCGAGATTGCAGACGGC 1097161 Query 80928 CACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGT 80987 ||||| |||| | | | |||| | |||||| ||||| | || |||||||| || || Sbjct 1097160 GACCTCGTCAGGGGCGGAATACTCCATGATTTCTGTGCAGAGGTTGGAAGACTTGATCGT 1097101 Query 80988 ACCCAGGTTTTTCTGGTTTGACTTGGC 81014 |||||||| |||||||| |||||||| Sbjct 1097100 GCCCAGGTTCTTCTGGTTAGACTTGGC 1097074 Score = 111 bits (122), Expect = 2e-19 Identities = 195/282 (69%), Gaps = 4/282 (1%) Strand=Plus/Minus Query 81470 ACCCCTTGGCGCGCACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCT 81529 ||||||||||||| | ||| ||| | || || ||||| | ||| |||||| Sbjct 1096516 ACCCCTTGGCGCGGATATTGTGGATGTGCATTCCAATACCACCAGCGGTCTTGGAAATCA 1096457 Query 81530 GAGCACACCGGTTCATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCA 81589 || || || | ||| ||||| || |||||||| || || | |||||| ||| || Sbjct 1096456 TTGCGCATGTCTTGAGGGTATCATAGATGCCCTCGATACTGTCGTCCTTCATGGCAACCA 1096397 Query 81590 AGAAACAGCTTGACATCTGAGGGCTTTTTGAGCCGGCATTGAACAGTGTTGGGGTCGCGT 81649 ||||||| || | |||||| | |||||||||||| || || ||| | |||| Sbjct 1096396 GGAAACAGGAAGAGAGCTGAGGATGGGGCGTGCCGGCATTGAAGAGCGTCGGGCTAGCGT 1096337 Query 81650 GAATGAAATAACGGTTTGACATCAGGTCATAGGTTTCCTTGACGCGTGG--AATATCGTC 81707 | |||| || || | ||||||||| |||||| | | | ||| || |||||| Sbjct 1096336 GTGTGAAGTACCGCTCGGACATCAGGGTGTAGGTTGC--TAATGCGCGGTCAATATCTCG 1096279 Query 81708 ACCGTGAATACCGATAGCTACACGCATAAACATGTACTGGGG 81749 ||||| ||||| || ||||||||||| | ||| | |||||| Sbjct 1096278 GCCGTGTATACCAATGGCTACACGCATCAGCATCTGCTGGGG 1096237 Score = 95.1 bits (104), Expect = 1e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 80035 CGCGTCCGCAGATAGTACATGCCCGTCTTGAGGCCCTTCTTCCAGCCGTACAGGTGCATA 80094 ||||| || || |||||||||||||||||||| ||||||||||||||||| | ||||| Sbjct 1098059 CGCGTACGAAGGTAGTACATGCCCGTCTTGAGCCCCTTCTTCCAGCCGTAGAAATGCATG 1098000 Query 80095 GAACTGAGCTTCGCAAGTGTGGGGTTCTCCATGAAGATGTTCAGAGACTGAGACTGACAG 80154 || |||||| | || || ||| ||| | || ||||| |||| ||| ||| Sbjct 1097999 GACGTGAGCTGGCCGAGAGTAGGGCTCTGGAGATGGACGTTCAAGCTCTGACTCTGGCAG 1097940 Query 80155 ATGAAAGCCCCACGATCTGCCGCCATTTCAATAATTGACTTTTGTGGAATTTCCCATACT 80214 ||||| || || || || || || | || | || ||| |||| || ||||| || Sbjct 1097939 ATGAACGCACCCCGGTCCGCGGCGAGGTCGAGGATCTTCTTCTGTGAGATCTCCCAGACG 1097880 Query 80215 GT 80216 || Sbjct 1097879 GT 1097878 >seq5 Length=1492030 Score = 107 bits (118), Expect = 2e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || ||||| || ||||| || || || ||||| || ||||| || ||||||| || ||| Sbjct 1092307 ATCCCTCCTGATCAGCAACGCCTGATCTTTGCAGGCAAGCAGCTGGAGGATGGCCGCACC 1092248 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 || | ||||| || |||| ||||||||||| |||||||| ||||||||||| || ||| Sbjct 1092247 CTGTCGGACTACAACATCCAGAAGGAATCCACCCTTCATCTCGTCTTGCGTCTGCGTGGT 1092188 Query 27631 GG 27632 || Sbjct 1092187 GG 1092186 >seq1 Length=2114445 Score = 100 bits (110), Expect = 3e-16 Identities = 136/188 (72%), Gaps = 4/188 (2%) Strand=Plus/Plus Query 64702 TCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGG 64761 ||| | |||| | | ||||||| || || ||| |||||| || || ||||| || || Sbjct 847477 TCGACCTTTGCTGAACGTCTCGTCGCCTTCGCCGCTGTGGAGGGCATCTTCTTCTCCGGC 847536 Query 64762 TCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCG 64821 || ||| | | || |||||| | || ||||| || || ||||| |||||| | || || Sbjct 847537 TCCTTCGCTGCCATCTTCTGGATGAAGAAGCGCGGTCTCATGCCCGGTCTGACATTCTCC 847596 Query 64822 AACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGGTTACC--CTGTTCA 64879 |||||||| ||||| || || ||||| | ||| || ||||| | || || |||| Sbjct 847597 AACGAGCTCATCTCCCGCGATGAGGGCATGCACACCGACTTTGCA--TGCCTACTCTTCA 847654 Query 64880 GCCACCTC 64887 |||||||| Sbjct 847655 GCCACCTC 847662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570309694240880