Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_028636.1
Length=135952
Score E
Sequences producing significant alignments: (Bits) Value
seq14 120 3e-22
seq3 113 4e-20
>seq14
Length=1069518
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || || |||||||||||| | || || || || || || | ||
Sbjct 1023518 CATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACACTCGAGGTTGAGTCATC 1023577
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || || | ||||| || || || || || || ||||| || || |||||
Sbjct 1023578 GGACACTATCGATAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCTGATCA 1023637
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|||||| | || | ||||||||| || |||||||| || || | || || |||||
Sbjct 1023638 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGTCGCACACTCTCGGACTACAA 1023697
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|||||| |||||||| || | || | || | ||| | || ||||| ||
Sbjct 1023698 CATTCAGAAGGAGTCAACGCTTCACCTTGTGCTTCGTCTCCGCGGTGGTAT 1023748
Score = 118 bits (130), Expect = 9e-22
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047
|||||||| || || || ||||||||||||||| | || |||||||| || || || |
Sbjct 1023291 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACTCTTGAGGTCGAGTCGAGC 1023350
Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107
||| | || || | ||||| || ||||| ||||| || || || || || || ||
Sbjct 1023351 GACACTATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 1023410
Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167
||||| | || | ||| || || || | || || | ||| | ||||| ||||||
Sbjct 1023411 CAGCGCCTTATCTTCGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 1023470
Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217
|| || ||||| || ||| | || |||||| | ||| | || ||||||||
Sbjct 1023471 ATCCAGAAGGAATCCACCCTTCACTTGGTTCTTCGTCTCCGTGGTGGCAT 1023520
>seq3
Length=1694370
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046
||||||||| ||||| || |||||||| |||||| | || || || || || || | ||
Sbjct 423214 CATGCAGATCTTTGTCAAGACTCTGACAGGCAAGACCATCACCCTCGAGGTCGAGTCATC 423155
Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106
||| | || || | ||||| |||||| || ||||| |||||||| || ||||| ||
Sbjct 423154 GGACACCATCGACAACGTCAAGGCAAAAATCCAGGACAAGGAAGGCATCCCTCCCGACCA 423095
Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166
|| || | || | || ||||| || | || ||| || || |||| || |||||
Sbjct 423094 GCAACGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCTGACTACAA 423035
Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216
|| || ||||||||||| | || |||| | ||| | || || ||||
Sbjct 423034 TATCCAGAAGGAGTCGACGCTTCACCTGGTGCTCCGTCTCCGTGGCGGCA 422985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 434917861788480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |