Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq14 120 3e-22 seq3 113 4e-20 >seq14 Length=1069518 Score = 120 bits (132), Expect = 3e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || || |||||||||||| | || || || || || || | || Sbjct 1023518 CATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACACTCGAGGTTGAGTCATC 1023577 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| || || || || || || ||||| || || ||||| Sbjct 1023578 GGACACTATCGATAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCTGATCA 1023637 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||||||||| || |||||||| || || | || || ||||| Sbjct 1023638 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGTCGCACACTCTCGGACTACAA 1023697 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 |||||| |||||||| || | || | || | ||| | || ||||| || Sbjct 1023698 CATTCAGAAGGAGTCAACGCTTCACCTTGTGCTTCGTCTCCGCGGTGGTAT 1023748 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||||||||||||| | || |||||||| || || || | Sbjct 1023291 ATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACTCTTGAGGTCGAGTCGAGC 1023350 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| ||||| || || || || || || || Sbjct 1023351 GACACTATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 1023410 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || || | || || | ||| | ||||| |||||| Sbjct 1023411 CAGCGCCTTATCTTCGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 1023470 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||| || ||| | || |||||| | ||| | || |||||||| Sbjct 1023471 ATCCAGAAGGAATCCACCCTTCACTTGGTTCTTCGTCTCCGTGGTGGCAT 1023520 >seq3 Length=1694370 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| ||||| || |||||||| |||||| | || || || || || || | || Sbjct 423214 CATGCAGATCTTTGTCAAGACTCTGACAGGCAAGACCATCACCCTCGAGGTCGAGTCATC 423155 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| |||||| || ||||| |||||||| || ||||| || Sbjct 423154 GGACACCATCGACAACGTCAAGGCAAAAATCCAGGACAAGGAAGGCATCCCTCCCGACCA 423095 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 || || | || | || ||||| || | || ||| || || |||| || ||||| Sbjct 423094 GCAACGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCTGACTACAA 423035 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCA 27216 || || ||||||||||| | || |||| | ||| | || || |||| Sbjct 423034 TATCCAGAAGGAGTCGACGCTTCACCTGGTGCTCCGTCTCCGTGGCGGCA 422985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434917861788480