Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq3 179 9e-40 seq14 170 4e-37 seq5 104 5e-17 seq7 95.1 3e-14 >seq3 Length=1694370 Score = 179 bits (198), Expect = 9e-40 Identities = 167/212 (79%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| ||||| || || ||||| || ||||||| ||||| | || || Sbjct 423511 AGCACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGACAGGGTACGGCCGTCC 423570 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || | || ||||||||||| | || ||||||||| Sbjct 423571 TCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 423630 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||| ||||| ||||| ||||| ||| || |||||||| ||||| ||| Sbjct 423631 TGGATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGTGTGATGGTC 423690 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| || || | |||||| Sbjct 423691 TTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 423722 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| || ||||| || ||||| || || || | ||| || | || || Sbjct 423002 AGCACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGACCGTCC 423061 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || ||||| ||||| ||||| | |||||||||||| Sbjct 423062 TCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCC 423121 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||| ||| || ||||| ||||||||||| || || |||||||| ||||| ||| Sbjct 423122 TGGATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACCTCGAGGGTGATGGTC 423181 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || |||||||| ||||| | |||||| Sbjct 423182 TTGCCTGTCAGAGTCTTGACAAAGATCTGCAT 423213 >seq14 Length=1069518 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||||||||| || ||||| || || ||||| || |||| || || | || ||| Sbjct 1023730 AGCACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGACCGTCT 1023671 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || || || || ||||| |||| || ||||| ||| Sbjct 1023670 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCC 1023611 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| || ||||||||||| ||||| ||| Sbjct 1023610 TGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAACCTCGAGTGTGATGGTC 1023551 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| ||||| | |||||| Sbjct 1023550 TTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 1023519 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || |||||||| || |||||||| || || || || | ||||| Sbjct 1024186 AGGACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 1024127 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| ||||||||||| || || ||||| ||||| | || ||||||||| Sbjct 1024126 TCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 1024067 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| ||||| || ||||||||||| | || || ||||||||||||||| Sbjct 1024066 TGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGACTCGACTTCGAGAGTGATCGTC 1024007 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | |||||| || || | |||||| Sbjct 1024006 TTGCCAGTCAAAGTCTTCACGAAAATCTGCAT 1023975 Score = 168 bits (186), Expect = 2e-36 Identities = 167/215 (78%), Gaps = 6/215 (3%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || | |||||| ||||| || || |||||||| || || | ||||| | ||||| Sbjct 1023502 AGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1023443 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||||||||| || ||||||||||||| || ||||||||| Sbjct 1023442 TCAAGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 1023383 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGAGTGATC 211079 || ||||| || ||||| ||||| ||||| ||| || ||||| ||||||||| Sbjct 1023382 TGAATCTTGGCCTTGACGTTATCGATAGTGTC---GCTCGACTCGACCTCAAGAGTGATC 1023326 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || |||||||| || || | |||||| Sbjct 1023325 GTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || ||||| || ||||| || ||||| || || || | |||||| | || || Sbjct 1023958 AGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCGTCC 1023899 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || || || ||||| | || ||||||||| Sbjct 1023898 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCC 1023839 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| || ||||| || || ||| || ||||| ||||| ||| Sbjct 1023838 TGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGACTTCGAGCGTGATGGTC 1023779 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| | ||||| || || | ||||| Sbjct 1023778 TTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747 >seq5 Length=1492030 Score = 104 bits (114), Expect = 5e-17 Identities = 84/102 (82%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| || ||||| ||||| || || |||||||| || |||| ||||| | ||||| || Sbjct 1092203 GACGAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGGCCATCCTC 1092262 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 ||||||||||||||| ||||| |||||||| || |||||||| Sbjct 1092263 CAGCTGCTTGCCTGCAAAGATCAGGCGTTGCTGATCAGGAGG 1092304 >seq7 Length=1357966 Score = 95.1 bits (104), Expect = 3e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 210890 TCAACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAG 210949 || ||| || | ||||| ||||| || ||||| || ||||||||||| || || | || Sbjct 1033446 TCCACGCAGACGGAGGACGAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGAGAG 1033387 Query 210950 GGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || | || ||||| ||||||||||| |||||||| |||||||| ||||| || || Sbjct 1033386 TGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGCGG 1033330 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150529688135