Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq14 170 5e-37 seq3 131 4e-25 seq7 98.7 2e-15 >seq14 Length=1069518 Score = 170 bits (188), Expect = 5e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || ||||| || || |||| ||||| ||| || ||| | ||||| Sbjct 1024186 AGGACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 1024127 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| |||||||||||||| || || |||||||| || ||||| |||||||| Sbjct 1024126 TCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 1024067 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||||||| ||||||||||| || || || || | ||||||||| Sbjct 1024066 TGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGACTCGACTTCGAGAGTGATCGTC 1024007 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | ||| | ||||| Sbjct 1024006 TTGCCAGTCAAAGTCTTCACGAAAATCTGCAT 1023975 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || |||||||| || |||| ||||| |||| | || | ||||| Sbjct 1023502 AGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCC 1023443 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||||||||||||||||||||| || || ||||| || |||||||| |||||||| Sbjct 1023442 TCAAGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCC 1023383 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||| || ||||| ||||| | || || || | ||||||||| Sbjct 1023382 TGAATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATCGTC 1023323 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||| ||| || | ||| | ||||| Sbjct 1023322 TTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291 Score = 89.7 bits (98), Expect = 1e-12 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| |||||||| || || || || |||| |||||||| | || || Sbjct 1023284 ACGAAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGACAGGGT 1023225 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 | ||||| || ||||| || ||||||||||| || || || |||||||| ||||| Sbjct 1023224 GCGGCCATCCTCAAGCTGTTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGAAT 1023168 >seq3 Length=1694370 Score = 131 bits (144), Expect = 4e-25 Identities = 147/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || || || || |||| |||||| || | | ||| | || || Sbjct 423002 AGCACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGAAAGAGTGCGACCGTCC 423061 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| ||||| || ||||| |||||||| || || ||||||||||| Sbjct 423062 TCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCC 423121 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| ||| ||| || ||||||||||| || | || || || | ||||| ||| Sbjct 423122 TGGATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGACCTCGAGGGTGATGGTC 423181 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| |||| ||| || Sbjct 423182 TTGCCTGTCAGAGTCTT 423198 Score = 125 bits (138), Expect = 2e-23 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || |||||||| || |||| ||||||||| | || || | || || Sbjct 423511 AGCACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGACAGGGTACGGCCGTCC 423570 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || | || ||||| || || || || |||||||| Sbjct 423571 TCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 423630 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| || || ||||| ||||| |||| || || || | ||||| ||| Sbjct 423631 TGGATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGTGTGATGGTC 423690 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | ||| || | ||| | ||||| Sbjct 423691 TTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 423722 >seq7 Length=1357966 Score = 98.7 bits (108), Expect = 2e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| |||||||| ||||||| ||||| |||| | || | || ||| Sbjct 1033433 AGGACGAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGAGAGTGTGCGGCCGTCT 1033374 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 || |||||||| || |||||||| || ||||| ||||||||||| || Sbjct 1033373 TCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGCGGGAT 1033327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529687348706