Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq14 114 3e-20 seq3 107 4e-18 >seq14 Length=1069518 Score = 114 bits (126), Expect = 3e-20 Identities = 155/214 (72%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || ||||| || ||||||||||| ||| | ||| | ||||| Sbjct 1024186 AGGACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCC 1024127 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || ||||||||||| | ||||||||| | | ||| || ||||| || Sbjct 1024126 TCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGGATACCCTCCTTGTCC 1024067 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTC--TGAACTCTCTACTTCAAGAGTAATAG 152070 || || || || ||| | || | | |||| || |||| ||||| ||||| || | Sbjct 1024066 TGGATCTTCGCCTTCACATTGTCGATGGTGTCGCTGGACTCG--ACTTCGAGAGTGATCG 1024009 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| || | |||||||||||| | |||||| Sbjct 1024008 TCTTGCCAGTCAAAGTCTTCACGAAAATCTGCAT 1023975 Score = 105 bits (116), Expect = 2e-17 Identities = 149/208 (72%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| || || || || ||||||||||| |||| | || | ||||| || | Sbjct 1023497 CAAG-TGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCCTCAA 1023439 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||||| ||||||||||| | ||||||||| | | || || ||||| || |||| Sbjct 1023438 GCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGGAATACCCTCCTTGTCCTGAA 1023379 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| ||| || |||||||| || || |||| Sbjct 1023378 TCTTGGCCTTGACGTTATCGATAGTGTCGCTCGACTCGACCTCAAGAGTGATCGTCTTGC 1023319 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || |||||||| ||||||| |||||| Sbjct 1023318 CGGTCAGAGTCTTGACGAAGATCTGCAT 1023291 Score = 95.1 bits (104), Expect = 3e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || |||||||| |||||||| || ||||| ||||| |||| | || | || || Sbjct 1023958 AGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAAAGGGTGCGACCGTCC 1023899 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | |||||| || | | ||| || ||||| || Sbjct 1023898 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGGATGCCCTCCTTGTCC 1023839 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || ||||| | || | | | || || || ||||| || || || || Sbjct 1023838 TGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGACTTCGAGCGTGATGGTC 1023779 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || ||||| | ||||| ||||||| ||||| Sbjct 1023778 TTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747 Score = 89.7 bits (98), Expect = 1e-12 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||| ||||| || ||||| || || |||||||| || | | || | || ||| Sbjct 1023730 AGCACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGAGAGTGTGCGACCGTCT 1023671 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | |||||| || | | || || ||||| || Sbjct 1023670 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGAATGCCCTCCTTATCC 1023611 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || ||||| | || | |||| || ||| || || || || || || Sbjct 1023610 TGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAACCTCGAGTGTGATGGTC 1023551 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || |||||||| |||| |||||| Sbjct 1023550 TTGCCGGTCAGGGTCTTCACAAAGATCTGCAT 1023519 >seq3 Length=1694370 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || || || ||||| || || || || ||||| |||||||| | | || | || || Sbjct 423511 AGCACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGACAGGGTACGGCCGTCC 423570 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || |||||||| |||||||||||||| | | ||| || ||||| || Sbjct 423571 TCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGGATGCCCTCCTTGTCC 423630 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| | || | |||| || ||| || || || || || || Sbjct 423631 TGGATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGTGTGATGGTC 423690 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||||||||| ||||||| |||||| Sbjct 423691 TTGCCAGTGAGAGTCTTGACGAAGATCTGCAT 423722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819336450429