Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq14 150 4e-31
seq3 150 4e-31
seq7 89.7 1e-12
>seq14
Length=1069518
Score = 150 bits (166), Expect = 4e-31
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| ||||||||||| ||| | || || || |||||||| ||||| || || | |||
Sbjct 1023978 CAGATTTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAAGTCGAGTCCAGCGAC 1024037
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| || || || ||||| |||||||| || || |||||||| ||||||||
Sbjct 1024038 ACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAG 1024097
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| ||||||||||| || || |||||||| ||||| | ||||| ||| || ||| ||
Sbjct 1024098 CGTCTTATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATC 1024157
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || ||||| |||||
Sbjct 1024158 CAGAAGGAGTCCACGCTGCACCTTGT 1024183
Score = 141 bits (156), Expect = 2e-28
Identities = 155/206 (75%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
||||| ||||| || || | || ||||| || ||||| ||||| || ||| || ||
Sbjct 1023750 CAAATCTTCGTCAAGACGTTGACGGGAAAGACCATCACGCTCGAAGTCGAATCGTCGGAT 1023809
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || |||||||| |||||||||||||| || || |||||||| || |||||
Sbjct 1023810 ACCATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGATCAGCAG 1023869
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || |||||||| || || | || ||| |||| || || ||
Sbjct 1023870 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCCGACTACAATATC 1023929
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || ||||| ||
Sbjct 1023930 CAGAAGGAGTCTACCCTTCATCTCGT 1023955
Score = 140 bits (154), Expect = 8e-28
Identities = 159/211 (75%), Gaps = 7/211 (3%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980
|| || ||||| || ||||| || || || |||||||| || ||||| || |||
Sbjct 1023294 CAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACTCTTGAGGTCGAGTCGAGC--- 1023350
Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040
||||| ||||| |||||||| |||||||||||||| || || || ||||| ||||||
Sbjct 1023351 GACACTATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 1023410
Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100
|| || ||||||||||| || || ||||| || ||||| | || || |||| || |||
Sbjct 1023411 CAGCGCCTTATCTTCGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 1023470
Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTT 178131
|||| || ||||| || || || |||| ||
Sbjct 1023471 ATCCAGAAGGAATCCACCCTTCA-CTTGGTT 1023500
Score = 120 bits (132), Expect = 7e-22
Identities = 150/206 (73%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || ||||| || || || || || || ||||| |||||||| || || |||
Sbjct 1023522 CAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACACTCGAGGTTGAGTCATCGGAC 1023581
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| |||||||| ||||| ||||| || || || || || || || |||||
Sbjct 1023582 ACTATCGATAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCTGATCAGCAG 1023641
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| ||||| || | || || | || || ||| |
Sbjct 1023642 CGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGTCGCACACTCTCGGACTACAACATT 1023701
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || ||||| || || |||||
Sbjct 1023702 CAGAAGGAGTCAACGCTTCACCTTGT 1023727
>seq3
Length=1694370
Score = 150 bits (166), Expect = 4e-31
Identities = 157/206 (76%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || || || || ||||| ||||| || || |||||||||||||| || || |||
Sbjct 423210 CAGATCTTTGTCAAGACTCTGACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCGGAC 423151
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| |||||||| ||| || |||||||| ||||| |||||||| |||||||||
Sbjct 423150 ACCATCGACAACGTCAAGGCAAAAATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAA 423091
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || |||||||| || || | |||||| | || || || ||
Sbjct 423090 CGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCTGACTACAATATC 423031
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
|| || || || || || || || ||
Sbjct 423030 CAGAAGGAGTCGACGCTTCACCTGGT 423005
>seq7
Length=1357966
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085
||||| || ||||||||||| || ||||||||||| || ||||||||||| || | ||
Sbjct 1033327 ATCCCGCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACA 1033386
Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
|| |||| || ||| ||||||| ||||| || || || || ||
Sbjct 1033387 CTCTCCGACTACAACATCCAAAAGGAATCCACCCTCCACCTCGT 1033430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203729673142206
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |