Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq14 150 4e-31 seq3 150 4e-31 seq7 89.7 1e-12 >seq14 Length=1069518 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| ||| | || || || |||||||| ||||| || || | ||| Sbjct 1023978 CAGATTTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAAGTCGAGTCCAGCGAC 1024037 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || || || ||||| |||||||| || || |||||||| |||||||| Sbjct 1024038 ACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGTATCCCTCCCGACCAGCAG 1024097 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||||||||| || || |||||||| ||||| | ||||| ||| || ||| || Sbjct 1024098 CGTCTTATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGCACTCTGAGCGACTACAACATC 1024157 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || ||||| ||||| Sbjct 1024158 CAGAAGGAGTCCACGCTGCACCTTGT 1024183 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || | || ||||| || ||||| ||||| || ||| || || Sbjct 1023750 CAAATCTTCGTCAAGACGTTGACGGGAAAGACCATCACGCTCGAAGTCGAATCGTCGGAT 1023809 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| |||||||||||||| || || |||||||| || ||||| Sbjct 1023810 ACCATTGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCCGATCAGCAG 1023869 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || |||||||| || || | || ||| |||| || || || Sbjct 1023870 CGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGTCGCACCCTTTCCGACTACAATATC 1023929 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || ||||| || Sbjct 1023930 CAGAAGGAGTCTACCCTTCATCTCGT 1023955 Score = 140 bits (154), Expect = 8e-28 Identities = 159/211 (75%), Gaps = 7/211 (3%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || ||||| || ||||| || || || |||||||| || ||||| || ||| Sbjct 1023294 CAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACTCTTGAGGTCGAGTCGAGC--- 1023350 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||| |||||||| |||||||||||||| || || || ||||| |||||| Sbjct 1023351 GACACTATCGATAACGTCAAGGCCAAGATTCAGGACAAGGAGGGTATTCCTCCTGACCAG 1023410 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || || ||||||||||| || || ||||| || ||||| | || || |||| || ||| Sbjct 1023411 CAGCGCCTTATCTTCGCTGGGAAGCAGCTTGAGGATGGCCGCACCCTCTCCGACTACAAC 1023470 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGTTT 178131 |||| || ||||| || || || |||| || Sbjct 1023471 ATCCAGAAGGAATCCACCCTTCA-CTTGGTT 1023500 Score = 120 bits (132), Expect = 7e-22 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || ||||| || || || || || || ||||| |||||||| || || ||| Sbjct 1023522 CAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACACTCGAGGTTGAGTCATCGGAC 1023581 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| ||||| || || || || || || || ||||| Sbjct 1023582 ACTATCGATAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCTGATCAGCAG 1023641 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || ||||| ||||| || | || || | || || ||| | Sbjct 1023642 CGTCTCATCTTCGCCGGCAAGCAGCTGGAAGACGGTCGCACACTCTCGGACTACAACATT 1023701 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || ||||| || || ||||| Sbjct 1023702 CAGAAGGAGTCAACGCTTCACCTTGT 1023727 >seq3 Length=1694370 Score = 150 bits (166), Expect = 4e-31 Identities = 157/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || ||||| ||||| || || |||||||||||||| || || ||| Sbjct 423210 CAGATCTTTGTCAAGACTCTGACAGGCAAGACCATCACCCTCGAGGTCGAGTCATCGGAC 423151 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| ||| || |||||||| ||||| |||||||| ||||||||| Sbjct 423150 ACCATCGACAACGTCAAGGCAAAAATCCAGGACAAGGAAGGCATCCCTCCCGACCAGCAA 423091 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| || || | |||||| | || || || || Sbjct 423090 CGGCTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGCACTCTTTCTGACTACAATATC 423031 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 423030 CAGAAGGAGTCGACGCTTCACCTGGT 423005 >seq7 Length=1357966 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 ||||| || ||||||||||| || ||||||||||| || ||||||||||| || | || Sbjct 1033327 ATCCCGCCCGACCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTCGAAGACGGCCGCACA 1033386 Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 || |||| || ||| ||||||| ||||| || || || || || Sbjct 1033387 CTCTCCGACTACAACATCCAAAAGGAATCCACCCTCCACCTCGT 1033430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203729673142206