Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08-
23] 99 sequences; 29,503,487 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq14 158 1e-33
seq3 138 1e-27
seq7 104 2e-17
seq5 87.8 2e-12
>seq14
Length=1069518
Score = 158 bits (174), Expect = 1e-33
Identities = 174/229 (76%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | |||| || || ||| |||||||| ||||| ||||||||
Sbjct 1023518 GCCACCACGGAGACGAAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGA 1023459
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||||||||| | || || |||||||| || ||||| || |||||||| ||||| | ||
Sbjct 1023458 GAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGG 1023399
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
|| | |||||||||| ||| | || || | ||| | | ||||||||||||||| |
Sbjct 1023398 AATACCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGACTCGA 1023340
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| | || ||||| || || ||||| ||||| ||||| ||||||||
Sbjct 1023339 CCTCAAGAGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291
Score = 145 bits (160), Expect = 7e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| ||||| | ||| || || ||||| ||||||||||||||| ||||| |||
Sbjct 1023745 CCACCGCGGAGACGAAGCACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGAG 1023686
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| || ||||||||||||||||| || || ||||| || || | ||||
Sbjct 1023685 AGTGTGCGACCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGA 1023626
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||| ||| || | || || | ||| | | |||||| ||||| ||
Sbjct 1023625 ATGCCCTCCTTATCC-TGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAAC 1023567
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||| | || || || || || ||||| ||||| || || |||||||||
Sbjct 1023566 CTCGAGTGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATG 1023518
Score = 143 bits (158), Expect = 2e-29
Identities = 170/228 (75%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||| ||||| || || ||||||||| || || ||||||||
Sbjct 1023973 CCACCACGGAGACGCAGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAA 1023914
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| |||| |||||||||||||||||||| ||||||||||| || || | ||
Sbjct 1023913 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGG 1023854
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| | || || | ||| | | || || ||| || ||
Sbjct 1023853 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGAC 1023795
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | ||| || || || ||||||| |||||| ||||| || |||||
Sbjct 1023794 TTCGAGCGTGATGGTCTTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747
Score = 138 bits (152), Expect = 1e-27
Identities = 169/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || ||||||||| ||||||||| ||||| ||||||
Sbjct 1024201 CCACCACGGAGACGAAGGACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTC 1024142
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| | || |||||||||||||| ||||| || || ||||| ||||| | ||
Sbjct 1024141 AGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGG 1024082
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| | |||||||||| ||| || |||| || | | | |||||||| ||||| ||
Sbjct 1024081 ATACCCTCCTTGTCCTGGATCTTCGCCTTC-ACATTGTCGATGGTGTCGCTGGACTCGAC 1024023
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| | || ||||| || || |||| ||||| ||||||||||||||
Sbjct 1024022 TTCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAAATCTGCAT 1023975
Score = 95.1 bits (104), Expect = 1e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || ||||| ||||||||| ||||| || || ||
Sbjct 1023289 CCACCACGAAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGAC 1023230
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || ||||| ||||| ||||| ||||||||||| ||||| | ||||
Sbjct 1023229 AGGGTGCGGCCATCCTCAAGCTGTTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGA 1023170
Query 41756 ACGCT 41760
| |||
Sbjct 1023169 ATGCT 1023165
>seq3
Length=1694370
Score = 138 bits (152), Expect = 1e-27
Identities = 170/230 (74%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || ||||| | |||||| || ||||| ||||||||| || || ||||| ||
Sbjct 422986 GCCGCCACGGAGACGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGA 423045
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|| ||||| |||| |||||||||||||| || || ||||| || || ||||| | ||
Sbjct 423046 AAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGG 423105
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || ||||||||| || ||||||| | ||| | | | ||||| ||||| |
Sbjct 423106 GATGCCTTCCTTGTCC-TGGATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGA 423164
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | || || || || || ||||| ||||| || || |||||||||
Sbjct 423165 CCTCGAGGGTGATGGTCTTGCCTGTCAGAGTCTTGACAAAGATCTGCATG 423214
Score = 122 bits (134), Expect = 8e-23
Identities = 166/229 (72%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||||| || || ||| |||||||| || || || || ||
Sbjct 423496 CCACCACGGAGACGAAGCACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGAC 423555
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || |||| || ||||||||||| ||||| ||||| | ||| ||||| | ||
Sbjct 423556 AGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGG 423615
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| || | || |||| ||| | | | ||||| ||||| ||
Sbjct 423616 ATGCCCTCCTTGTCC-TGGATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 423674
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||| | || || || || || || || ||||| ||||| |||||||||
Sbjct 423675 CTCGAGTGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCATG 423723
Score = 93.3 bits (102), Expect = 4e-14
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | ||| | || || ||| |||||||||||||| ||||| ||
Sbjct 423214 GCCACCCCGGAGACGAAGCACTAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCCGA 423273
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748
|| ||||| |||| || ||||||||||||||||| ||||| | ||| |||||
Sbjct 423274 AAGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTC 423327
>seq7
Length=1357966
Score = 104 bits (114), Expect = 2e-17
Identities = 97/122 (80%), Gaps = 1/122 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | || || || || ||| ||||| || ||||| ||||||||
Sbjct 1033449 GCCTCCACGCAGACGGAGGACGAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGA 1033390
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGG 41753
||| ||||| |||| |||||||||||||||||||| |||||||| || ||||| ||||
Sbjct 1033389 GAGTGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGCGG 1033330
Query 41754 GA 41755
||
Sbjct 1033329 GA 1033328
>seq5
Length=1492030
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| || || ||||| || ||| |||||||| ||||| ||||| ||
Sbjct 1092186 CCACCACGCAGACGCAAGACGAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 1092245
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748
|||||||| | || || ||||||||||| || || |||||||| || || ||
Sbjct 1092246 AGGGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATCAGGCGTTGCTGATC 1092298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303427898800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |