Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dacryopinax_20primogenitus_20[genbank_20GCA_5F000292625.1_202012-08- 23] 99 sequences; 29,503,487 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq14 158 1e-33 seq3 138 1e-27 seq7 104 2e-17 seq5 87.8 2e-12 >seq14 Length=1069518 Score = 158 bits (174), Expect = 1e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| || || ||| |||||||| ||||| |||||||| Sbjct 1023518 GCCACCACGGAGACGAAGAACCAAGTGAAGGGTGGATTCCTTCTGGATGTTGTAGTCGGA 1023459 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| | || || |||||||| || ||||| || |||||||| ||||| | || Sbjct 1023458 GAGGGTGCGGCCATCCTCAAGCTGCTTCCCAGCGAAGATAAGGCGCTGCTGGTCAGGAGG 1023399 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 || | |||||||||| ||| | || || | ||| | | ||||||||||||||| | Sbjct 1023398 AATACCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTATCGATAGTGTCGCTCGACTCGA 1023340 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| | || ||||| || || ||||| ||||| ||||| |||||||| Sbjct 1023339 CCTCAAGAGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 1023291 Score = 145 bits (160), Expect = 7e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | ||| || || ||||| ||||||||||||||| ||||| ||| Sbjct 1023745 CCACCGCGGAGACGAAGCACAAGGTGAAGCGTTGACTCCTTCTGAATGTTGTAGTCCGAG 1023686 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| || ||||||||||||||||| || || ||||| || || | |||| Sbjct 1023685 AGTGTGCGACCGTCTTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCAGGGGGA 1023626 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||| ||| || | || || | ||| | | |||||| ||||| || Sbjct 1023625 ATGCCCTCCTTATCC-TGGATCTTGGCCTTGACGTTATCGATAGTGTCCGATGACTCAAC 1023567 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || || ||||| ||||| || || ||||||||| Sbjct 1023566 CTCGAGTGTGATGGTCTTGCCGGTCAGGGTCTTCACAAAGATCTGCATG 1023518 Score = 143 bits (158), Expect = 2e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| ||||| || || ||||||||| || || |||||||| Sbjct 1023973 CCACCACGGAGACGCAGCACGAGATGAAGGGTAGACTCCTTCTGGATATTGTAGTCGGAA 1023914 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||||||||| ||||||||||| || || | || Sbjct 1023913 AGGGTGCGACCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCGGGAGGG 1023854 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | ||| | | || || ||| || || Sbjct 1023853 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACGTTATCAATGGTATCCGACGATTCGAC 1023795 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | ||| || || || ||||||| |||||| ||||| || ||||| Sbjct 1023794 TTCGAGCGTGATGGTCTTTCCCGTCAACGTCTTGACGAAGATTTGCAT 1023747 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || ||||||||| ||||||||| ||||| |||||| Sbjct 1024201 CCACCACGGAGACGAAGGACAAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCGCTC 1024142 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || |||||||||||||| ||||| || || ||||| ||||| | || Sbjct 1024141 AGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATAAGACGCTGCTGGTCGGGAGGG 1024082 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | |||||||||| ||| || |||| || | | | |||||||| ||||| || Sbjct 1024081 ATACCCTCCTTGTCCTGGATCTTCGCCTTC-ACATTGTCGATGGTGTCGCTGGACTCGAC 1024023 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || | || ||||| || || |||| ||||| |||||||||||||| Sbjct 1024022 TTCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAAATCTGCAT 1023975 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || ||||| ||||||||| ||||| || || || Sbjct 1023289 CCACCACGAAGACGGAGGACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAATCCGAC 1023230 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || ||||| ||||| ||||| ||||||||||| ||||| | |||| Sbjct 1023229 AGGGTGCGGCCATCCTCAAGCTGTTTGCCAGCGAAGATCAGGCGCTGCTGGTCGGGGGGA 1023170 Query 41756 ACGCT 41760 | ||| Sbjct 1023169 ATGCT 1023165 >seq3 Length=1694370 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | |||||| || ||||| ||||||||| || || ||||| || Sbjct 422986 GCCGCCACGGAGACGGAGCACCAGGTGAAGCGTCGACTCCTTCTGGATATTGTAGTCAGA 423045 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| |||| |||||||||||||| || || ||||| || || ||||| | || Sbjct 423046 AAGAGTGCGACCGTCCTCGAGCTGCTTGCCAGCAAAGATCAGCCGTTGCTGGTCGGGAGG 423105 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || ||||||||| || ||||||| | ||| | | | ||||| ||||| | Sbjct 423106 GATGCCTTCCTTGTCC-TGGATTTTTGCCTTGACGTTGTCGATGGTGTCCGATGACTCGA 423164 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || ||||| ||||| || || ||||||||| Sbjct 423165 CCTCGAGGGTGATGGTCTTGCCTGTCAGAGTCTTGACAAAGATCTGCATG 423214 Score = 122 bits (134), Expect = 8e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||||| || || ||| |||||||| || || || || || Sbjct 423496 CCACCACGGAGACGAAGCACCAGGTGAAGGGTGGATTCCTTCTGGATATTGTAATCCGAC 423555 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || ||||||||||| ||||| ||||| | ||| ||||| | || Sbjct 423556 AGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATCAGCCTCTGCTGGTCAGGAGGG 423615 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| || | || |||| ||| | | | ||||| ||||| || Sbjct 423616 ATGCCCTCCTTGTCC-TGGATCTTGGCTTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 423674 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || || || || ||||| ||||| ||||||||| Sbjct 423675 CTCGAGTGTGATGGTCTTGCCAGTGAGAGTCTTGACGAAGATCTGCATG 423723 Score = 93.3 bits (102), Expect = 4e-14 Identities = 89/114 (78%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | ||| | || || ||| |||||||||||||| ||||| || Sbjct 423214 GCCACCCCGGAGACGAAGCACTAAGTGAAGGGTGGATTCCTTCTGAATGTTGTAGTCCGA 423273 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 || ||||| |||| || ||||||||||||||||| ||||| | ||| ||||| Sbjct 423274 AAGAGTGCGACCGTCCTCAAGCTGCTTGCCGGCGAAGATCAGCCTCTGCTGGTC 423327 >seq7 Length=1357966 Score = 104 bits (114), Expect = 2e-17 Identities = 97/122 (80%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | || || || || ||| ||||| || ||||| |||||||| Sbjct 1033449 GCCTCCACGCAGACGGAGGACGAGGTGGAGGGTGGATTCCTTTTGGATGTTGTAGTCGGA 1033390 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGG 41753 ||| ||||| |||| |||||||||||||||||||| |||||||| || ||||| |||| Sbjct 1033389 GAGTGTGCGGCCGTCTTCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGCGG 1033330 Query 41754 GA 41755 || Sbjct 1033329 GA 1033328 >seq5 Length=1492030 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || || ||||| || ||| |||||||| ||||| ||||| || Sbjct 1092186 CCACCACGCAGACGCAAGACGAGATGAAGGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 1092245 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748 |||||||| | || || ||||||||||| || || |||||||| || || || Sbjct 1092246 AGGGTGCGGCCATCCTCCAGCTGCTTGCCTGCAAAGATCAGGCGTTGCTGATC 1092298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303427898800