Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1 105 7e-18 >seq1 Length=4122216 Score = 105 bits (116), Expect = 7e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 ||||| || | | ||| || ||||| || || || | |||||||| ||| || ||| Sbjct 3090394 CCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACCGGGCATGAGTCCACGCTTC 3090335 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || | |||||| || || || ||||| ||||||||||||| ||||| Sbjct 3090334 TTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGATACCCTCGACGGCGGCAAAG 3090275 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164 ||||| | || |||||| | || | | | || |||||| ||| || |||| ||| Sbjct 3090274 GCGATGAGGCGCTCGGCGAAGGTGGACTTCTCGTCTGTAATCCACTTCAGCGCCCAGTCG 3090215 Query 17165 GCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA 17205 || || | ||| ||||| || || || ||||| | ||| Sbjct 3090214 GCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCGTCAAA 3090174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545263595360