Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq1 102 7e-17 >seq1 Length=4122216 Score = 102 bits (112), Expect = 7e-17 Identities = 100/129 (78%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| ||||||||||||||||| || || || ||||| | Sbjct 3073727 CCACCACGCAGACGAAGCACCAAGTGCAAAGTGGACTCCTTCTGGATATTGTAGTCGGAA 3073786 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 |||||| || ||||||||| ||||||||| || |||| || | ||||||||| ||| Sbjct 3073787 AGGGTTCGGCCGTCCTCCAACTGTTTGCCGGCGAAAATGAGACGCTGCTGGTCTGGGGGA 3073846 Query 21069 ACGCCTTCC 21077 | ||| ||| Sbjct 3073847 ATGCCCTCC 3073855 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038 || |||||||| || ||||| ||||| | || ||| | |||| || ||||||||||| Sbjct 3074035 GTAGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTTCGCCCGTCTTCGAGCTGTTTGCCG 3074094 Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098 || |||| | || ||||||||| ||| | || || ||||| |||||| ||| Sbjct 3074095 GCGAAAATCAATCGCTGCTGGTCTGGGGGAATACCCTCTTTGTCCTGGATCTTGGCTTTA 3074154 Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158 || | | ||| || || | || ||| ||| | ||| ||||| |||||||| | || Sbjct 3074155 ACGTTGTCGATGGTGTCGCTGGACTCGACTTCGAGGGTGATGGTTTTGCCGGTGAGGGTC 3074214 Query 21159 TTGACAAATATTTGCATT 21176 || || || || |||||| Sbjct 3074215 TTCACGAAGATCTGCATT 3074232 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422258932393232