Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq9 201 2e-46 >seq9 Length=941136 Score = 201 bits (222), Expect = 2e-46 Identities = 421/624 (67%), Gaps = 5/624 (1%) Strand=Plus/Minus Query 248818 TACGATTTCTTTGCTTTCAAAACGCTGGAGAAATCGTATCTCCTCAAAATTGATGGCAAG 248877 ||| | | ||||| ||||||||| || ||| ||| || ||||| | | || || Sbjct 165763 TACAACTACTTTGGTTTCAAAACCCTCGAGCGATCCTACCTCCTTCGCGTCAACGGTAAA 165704 Query 248878 ATCGTGGAACGAATTCAGCACATGTTGATGCGAGTGGCTGTCGGGATTCACAAGGATGAC 248937 ||||| ||||| ||||||||| | ||||| || || ||||| || ||| | || Sbjct 165703 ATCGTCGAACGTCCCCAGCACATGATCATGCGTGTTGCCGTCGGTATCCACGGTGCCAAC 165644 Query 248938 ATAGAGAGCGTGCTCGAGACGTACACCGGAATGAGTGAACGCTGGATGACACATGCCACA 248997 || || | || | ||||| |||| ||| ||| || | | || || ||| | Sbjct 165643 ATTGACAAGGTCATTGAGACTTACAATCTCATGTCTGAGCGATACTTCACCCACGCCTCC 165584 Query 248998 CCGACGCTCTTCAACGCCGGTACCGTCAACAATCAGCTGAGCTCGTGCTTTCTTCTTGCC 249057 || || |||||||||||||||||| |||| || || || ||||| ||| | ||| Sbjct 165583 CCTACCCTCTTCAACGCCGGTACCCCCAACCCCCAAATGTCATCCTGCTTCCTTGTCGCC 165524 Query 249058 ATGCAAGACGACTCTGTCGACGGCATTTATGACACGCTTAA-ACAGACGGCGAAGATTTC 249116 ||| | |||||||| | || || || || || || || || || | ||| |||| || Sbjct 165523 ATGAAGGACGACTCGATTGAGGGGATCTACGAGACCCTCAAGACCTGC-GCGCAGATCTC 165465 Query 249117 TAAATTCGCGGGCGGAATCGGTCTCTCCGTCTCCAACATCCGAGCGAAGGGTTCGTACAT 249176 || || || |||||||| ||| | || |||| |||| || ||||| ||||| || Sbjct 165464 CAAGACTGCCGGAGGAATCGGACTCCACATCCACAACGTCCGCGCTAAGGGCTCGTATAT 165405 Query 249177 CAAAGGTACAAATGGGGTCAGTGATGGTATCGTACCCCTCCTTCGATGCTTTGAGTCCAC 249236 ||||| || || | | |||||||| ||| | || || |||||| |||| Sbjct 165404 TGCCGGTACCAACGGTTACTCGAACGGTATCGTTCCCATGCTCCGCGCCTTTGACGCCAC 165345 Query 249237 CGCCAGGTTCATCAACCAGGCCGGGCGC---CGAAAGGGGTCGTTCGCCATGTATTTGGA 249293 || | | || |||| | || | ||| ||| |||||||||| || | || Sbjct 165344 GGCGCGATATGTCGACCAAGGTGGAAACAAGCGACCGGGTGCGTTCGCCATCTACCTCGA 165285 Query 249294 AGTGTGGCACGCCGATATATTGGAGTTCCTGGACTTGAAAAAGAACAACGGCAACGAGCT 249353 ||||||||||| || || |||||||| ||||||| |||||| |||| || || Sbjct 165284 GCCCTGGCACGCCGACATCTTCGAGTTCCTCGACTTGAGGAAGAACCACGGTAAAGAAGA 165225 Query 249354 CATGAGAGCGCGTGACCTCTTCTACGGCCTGTGGGTCTCCGACTTGTTCATGCGCCGCGT 249413 | | || || ||||| ||||||| ||| ||| |||||||| | |||||| || || Sbjct 165224 GGTCCGTGCTCGGGACCTGTTCTACGCCCTCTGGATCTCCGACCTCTTCATGAAGCGTGT 165165 Query 249414 CAAGGCCGACGGCGATTGGACGCT 249437 | || | ||||| || ||||| || Sbjct 165164 CGAGTCGGACGGTGACTGGACCCT 165141 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073765684603136