Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq9 105 1e-17 >seq9 Length=941136 Score = 105 bits (116), Expect = 1e-17 Identities = 185/266 (70%), Gaps = 4/266 (2%) Strand=Plus/Plus Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGC-CGC-CTCCTTAAGAGTATCA 94836 ||||| |||| |||||| |||||||||||||| ||| ||| ||| || || || Sbjct 165437 GTGGAGTCCGATTCCTCCGGCAGTCTTGGAGAT--CTGCGCGCAGGTCTTGAGGGTCTCG 165494 Query 94837 TAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGT 94896 || || |||||||| || || | | | | | ||||||||| || || | |||||| Sbjct 165495 TAGATCCCCTCAATCGAGTCGTCCTTCATGGCGACAAGGAAGCAGGATGACATTTGGGGG 165554 Query 94897 GTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATG 94956 || || || || || || || ||||| || ||||| || || || |||||| Sbjct 165555 TTGGGGGTACCGGCGTTGAAGAGGGTAGGGGAGGCGTGGGTGAAGTATCGCTCAGACATG 165614 Query 94957 AGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGC 95016 |||| || || |||||||| | |||| | ||||| || ||||| || |||||| Sbjct 165615 AGATTGTAAGTCTCAATGACCTTGTCAATGTTGGCACCGTGGATACCGACGGCAACACGC 165674 Query 95017 ATAATCATGTCCTGAGGGCGCTCAAC 95042 || ||||||| ||| || || || || Sbjct 165675 ATGATCATGTGCTGGGGACGTTCGAC 165700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583340689660