Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq1 116 5e-21 >seq1 Length=4122216 Score = 116 bits (128), Expect = 5e-21 Identities = 179/251 (71%), Gaps = 7/251 (3%) Strand=Plus/Minus Query 36158 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 36217 || || || ||| ||| |||||||| || | || | |||||||| || ||||| Sbjct 3090415 CAGGCAAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGA 3090356 Query 36218 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 36277 |||||||| || |||||||| || ||||| || ||||| || || || || || ||||| Sbjct 3090355 CCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAG 3090296 Query 36278 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACT----GTCATG 36333 || || || || || |||||||| || || | ||| | | || ||| ||| || Sbjct 3090295 ATACCCTCGACGGCGGCAAAGGCGATGAGGCGCTCGGCGAAGGTGG-ACTTCTCGTC-TG 3090238 Query 36334 TA-TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCAT 36392 || ||||||| | ||||| ||||||||||| || | || || || || || || || | Sbjct 3090237 TAATCCACTTCAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCGT 3090178 Query 36393 TAAAGAGATAG 36403 |||||| ||| Sbjct 3090177 CAAAGAGGTAG 3090167 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658172372187680