Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01]
52 sequences; 19,344,119 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 8e-15
seq3 95.1 3e-14
>seq1
Length=4122216
Score = 96.9 bits (106), Expect = 8e-15
Identities = 127/176 (72%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443
||||| || ||||| | || || || | ||| || ||||| ||||| | | ||| ||
Sbjct 3074333 TAGTCGGAAAGAGTGCGGCCATCCTCCAATTGCTTACCAGCGAAAATCAATCGCTGCTGG 3074392
Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503
|| || || || || || || ||||||||||| || || ||||| || | ||| |||
Sbjct 3074393 TCTGGTGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACATTGTCAATGGTGTCGGAC 3074452
Query 104504 GGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
| || || || || || || ||||| || ||||| ||||| || || ||||||||
Sbjct 3074453 GACTCAACTTCGAGGGTGATTGTCTTGCCGGTAAGAGTTTTGACGAAGATCTGCAT 3074508
>seq3
Length=1461739
Score = 95.1 bits (104), Expect = 3e-14
Identities = 97/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 269136 TAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTT 269195
|||| ||||| || |||||||| || ||||| ||||| || || |||||||||||||
Sbjct 1187614 TAGTCGCTTTCGCTTGCGTAGAAGGCATCTTCTTCTCGGGCTCCTTCGCCGCTATCTTTT 1187673
Query 269196 GGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGG 269255
|||||||||| | || || ||||| ||||| || ||||| || || | || ||| | |
Sbjct 1187674 GGTTGAAGAAGCGGGGTCTGATGCCTGGATTGACATTCTCCAATGAGCTCATCAGCCGAG 1187733
Query 269256 ACGAAGG 269262
| || ||
Sbjct 1187734 ATGAGGG 1187740
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151397632880816
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |