Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq3 131 3e-26 seq26 127 3e-25 seq1 118 2e-22 >seq3 Length=1461739 Score = 131 bits (144), Expect = 3e-26 Identities = 110/135 (81%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 16454 CTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGT 16513 ||||| || |||||||| || ||||||||||| |||||||||||||| || ||||| || Sbjct 827914 CTTCGTGACAACATCCAGGGTATCACCAAGCCCGCTATCCGTCGTCTCGCACGTCGAGGA 827973 Query 16514 GGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 || ||||||||| ||||||| | |||| || |||| ||||| |||| | ||||||||| Sbjct 827974 GGTGTCAAGCGTATCTCTGGTCTCATCTACGAGGAGACTCGTGGTGTTCTAAAGATCTTC 828033 Query 16574 CTCAAGACCGTTATC 16588 || ||| ||| ||| Sbjct 828034 CTTGAGAACGTCATC 828048 >seq26 Length=36216 Score = 127 bits (140), Expect = 3e-25 Identities = 106/130 (82%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 16459 AGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGT 16518 ||| |||||||| || ||||||||||| ||||| |||||||| || ||||||||||| || Sbjct 19289 AGACAACATCCAGGGTATCACCAAGCCCGCTATTCGTCGTCTTGCCCGTCGTGGTGGTGT 19348 Query 16519 CAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAA 16578 ||||||| ||||||| | |||| || |||| || | ||| |||||||||||||| | Sbjct 19349 CAAGCGTATCTCTGGTCTCATCTACGAGGAGACCCGAGGTGTCTTGAAGATCTTCCTTGA 19408 Query 16579 GACCGTTATC 16588 || ||| ||| Sbjct 19409 GAACGTCATC 19418 >seq1 Length=4122216 Score = 118 bits (130), Expect = 2e-22 Identities = 95/115 (83%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 16459 AGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGT 16518 ||| |||||||| || ||||||||||| |||||||||||||| || ||||| || || || Sbjct 3927590 AGACAACATCCAGGGTATCACCAAGCCTGCTATCCGTCGTCTTGCCCGTCGAGGAGGTGT 3927531 Query 16519 CAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTC 16573 ||||||| ||||||| | | || || |||| ||||| ||| |||||||||||| Sbjct 3927530 CAAGCGTATCTCTGGTCTCATTTACGAGGAGACTCGTGGTGTCTTGAAGATCTTC 3927476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075152456036