Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 >seq1 Length=4122216 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/206 (71%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||||| | ||| |||| || | ||| Sbjct 3074029 TGAAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAAAGCGTTCGCCCGTCTTCGAGCTGT 3074088 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GGCAATTT 16850 ||||| || |||| | ||||| ||||| || | ||||||||||| || || Sbjct 3074089 TTGCCGGCGAAAATCAATCGCTGCTGGTCTGGGGGAATACCCTCTTTGTCCTGGATCTTG 3074148 Query 16851 GCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGG 16910 ||| || || | | | | ||||||| || ||| ||| | |||||||||||| |||| Sbjct 3074149 GCT--TTAACGTTGTCGATGGTGTCGCTGGACTCGACTTCGAGGGTGATGGTTTTGCCGG 3074206 Query 16911 TCAGCGTTTTGACAAAAATCTGCATT 16936 | || || || || || ||||||||| Sbjct 3074207 TGAGGGTCTTCACGAAGATCTGCATT 3074232 Score = 82.4 bits (90), Expect = 6e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| |||| ||||||||||| || || |||||||||| | |||| | ||||| Sbjct 3073742 AGCACCAAGTGCAAAGTGGACTCCTTCTGGATATTGTAGTCGGAAAGGGTTCGGCCGTCC 3073801 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTC 16821 ||||| |||||||| || |||| || ||||| ||||| Sbjct 3073802 TCCAACTGTTTGCCGGCGAAAATGAGACGCTGCTGGTC 3073839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087743275480