Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 3e-15 >seq1 Length=4122216 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/205 (71%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| | ||||| ||| ||||||| ||||||| ||||| Sbjct 3074232 AATGCAGATCTTCGTGAAGACCCTCACCGGCAAAACCATCACCCTCGAAGTCGAGTCCAG 3074173 Query 25058 TGACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| | | |||| || | || |||||||| || ||||| || |||| Sbjct 3074172 CGACACCATCGACAACGTTAAAGCCAAGATCCAG-GACAAAGAGGGTATTCCCCCAGACC 3074114 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 | ||||| | ||||| ||||||||||| | ||||| | || || | ||| |||| Sbjct 3074113 AGCAGCGATTGATTTTCGCCGGCAAACAGCTCGAAGACGGGCGAACGCTTTCCGACTACA 3074054 Query 25177 ATATTCAAAAAGAATCCACGCTACA 25201 | || || || || || || || || Sbjct 3074053 ACATCCAGAAGGAGTCTACACTTCA 3074029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327725378380