Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1 104 3e-17 >seq1 Length=4122216 Score = 104 bits (114), Expect = 3e-17 Identities = 176/252 (70%), Gaps = 6/252 (2%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||||||||| || | ||| || || || || || | ||| ||| ||| || | Sbjct 3090416 GCAGGCAAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAG 3090357 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||| || | ||||| || ||||||||||| || || || || || || || || || Sbjct 3090356 ACCGGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAA 3090297 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATT-ACTGC 93269 ||||| || ||||| ||||| || | | || ||||| || | ||| || | | Sbjct 3090296 GATACCCTCGACGGCGGCAAAGGCGATGAGGCGCTCGGCGAA---GGTGGACTTCTCGTC 3090240 Query 93270 TG--ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 || ||||| || | ||||| ||||| || ||||| || || || | || ||||| || Sbjct 3090239 TGTAATCCACTTCAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGC 3090180 Query 93328 GTTAAATAGGTA 93339 || ||| ||||| Sbjct 3090179 GTCAAAGAGGTA 3090168 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860438040480