Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dioszegia_20aurantiaca_20[genbank_20GCA_5F001600655.1_202016-03-01] 52 sequences; 19,344,119 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq9 260 2e-64 seq1 152 6e-32 seq3 98.7 1e-15 >seq9 Length=941136 Score = 260 bits (288), Expect = 2e-64 Identities = 895/1384 (65%), Gaps = 35/1384 (3%) Strand=Plus/Plus Query 113953 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCAT 114012 |||||| ||||| |||||||| || || | || |||| |||||||| || ||||| Sbjct 164324 CGTGTAGGGCTCGAAGCACTCGTTCCAGCCTAGAATCTGGGATGTGGAGGCGGTAGGCAT 164383 Query 114013 GGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTC 114072 ||| || | |||||| ||| || | ||| | ||| | || | | ||||| | Sbjct 164384 GGGAGCGACAAGAAGGGAGTTTCGTACACCGTGCTCCTTGATCTGGGCTCGGAGGGTGGA 164443 Query 114073 CCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATA--TCAAACTGGAGGATACCTTGG 114130 |||||| | || | || | | ||| || | || || ||||| | || || Sbjct 164444 CCAGTCCCAAA-GATCGGTGGGGACACG-GCCCCAGAGGTCGAATTGGAGTTTGCCCTGC 164501 Query 114131 GAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTC 114190 || || || ||||| |||||||||| ||| ||| |||| ||| | | Sbjct 164502 GACATGGGGGAACCCTCGTATGTCTCGTACTTGCCGAGCTCCTGGGCCATCTCGCACGAC 164561 Query 114191 GCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCG 114250 ||||||||||| ||||| || |||||||| || || | || | | | || || Sbjct 164562 GCCTCGAGGGCGGCGTGGTAGATTGTCTCGAAGATCTGGATGTTGAGTTCGCGAGCGGCG 164621 Query 114251 TCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGG 114310 || || || | | ||| || || |||| |||||||| ||||||||||| Sbjct 164622 GGAGATTCGAAGGGCATGCGGAGAGCCATGAAGGCATCGGCGAGACCCTGGACACCGAGA 164681 Query 114311 CCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCA---CGGGATAAAAATTC 114367 || | ||||| || | ||| || || || | || ||| | ||||||| | || Sbjct 164682 CCGACGGGGCGGTGGCGCATGTTGGAGTTCTGCGC---CTCGATGACGGGATAGTAGTTT 164738 Query 114368 CTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCG 114427 | | ||| ||| | | || |||||||| ||||||||||| || || ||||| | | Sbjct 164739 CGAGAGATGACCTGGTCCAAGTTCTTGGTGACGACCTTTGTGATCTCGTGGAGCTTCTTG 164798 Query 114428 TAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTA 114487 | || | || |||| | ||| | || ||||||| || || |||||| Sbjct 164799 AAGTCGTAGACCCGCTTCTCCATGTCGACGAAAGCGGGGAGGGCGAGGGAGGCAAGATTA 164858 Query 114488 CACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTC 114547 || |||| ||| || ||| |||||| ||||| || ||||| | || || Sbjct 164859 CAGACAGCAACCTCGTCAGGCGCAGAGTACTCGATAATCTCGGTACAAAGGTTGGAGGAT 164918 Query 114548 TTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATG 114607 ||||| || || | | | || || || || | ||| || |||||||| |||||| Sbjct 164919 TTAATCGTACCGAGATGTTGCTGGTTCGATTTGGCGTTCGCAGCGTCCTTGTAGAGCATG 164978 Query 114608 TATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGG 114666 | || || ||||| || || | || ||| || || ||||| | || | | | | Sbjct 164979 AAGGGACCGCCAGTCTCGGTCTGAGCCTCGAGGATGGCGAACCAGAGCTTCTGAGCTTTG 165038 Query 114667 CACAGTGGCGTTGGCTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCTTCAAA 114720 ||| || |||||||| ||| ||||||| ||| || || || || Sbjct 165039 A----TGGTCTT---TCGCCCCTTCCCAGCCTTCTCGTACGACTCGTACAGCGCCTCGAA 165091 Query 114721 CTCTTCACCCACGG--CCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCAT 114778 || || || | | | || | ||| || || || | || || | ||| | ||| Sbjct 165092 CT--TCTCCGAGTGAACATCGGCGAGACCGGGGCACTCTGCGGGACACATGAGGGTCCAG 165149 Query 114779 TGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGA 114838 | ||| || ||| |||||||||||||||||||| | ||||||||| || |||| || Sbjct 165150 TCACCGTCCGACTCGACACGCTTCATGAAGAGGTCGGAGATCCAGAGGGCGTAGAACAGG 165209 Query 114839 TCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATA 114898 |||||| || | ||||| | || || || | ||| || | || || | ||| Sbjct 165210 TCCCGAGCACGGACCTCTTCTTTACCGTGGTTCTTCCTCAAGTCGAGGAACTCGAAGATG 165269 Query 114899 TCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGACGA---CCAGCCTGG 114955 || |||||||| || || ||||| | |||| | ||| || ||| | ||| Sbjct 165270 TCGGCGTGCCAGGGCTCGAGGTAGATGGCGAACGCACCCGGTCGCTTGTTTCCACCTTGG 165329 Query 114956 TTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGG 115015 | ||||| | ||| ||||| | ||| |||| ||||| |||| |||||| | || | Sbjct 165330 TCGACATATCGCGCCGTGGCGTCAAAGGCGCGGAGCATGGGAACGATACCGTTCGAGTAA 165389 Query 115016 CCATTTGTCCCCCGAATA--CGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAA 115073 || || || || |||| |||| | | | || | ||| | |||||||| | || | Sbjct 165390 CCGTTGGTACCGGCAATATACGAGCCCT--TAGCGCGGACGTTGTGGATGTGGAGTCCGA 165447 Query 115074 TACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGA 115133 | || || || ||| ||||| |||||||| | |||| | |||||||||| || | Sbjct 165448 TTCCTCCGGCAGTCTTGGAGATCTGCGCGCAGGTCTTGAGGGTCTCGTAGATCCCCTCAA 165507 Query 115134 TCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAG 115193 ||||||| |||| | |||| |||||||||| |||||||| || | || ||||| | Sbjct 165508 TCGAGTCGTCCTTCATGGCGACAAGGAAGCAGGATGACATTTGGGGGTTGGGGGTACCGG 165567 Query 115194 CGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCT 115253 ||||||||||||| || | |||||| |||| | | ||||| || ||| |||| Sbjct 165568 CGTTGAAGAGGGTAGGGGAGGCGTGGGTGAAGTATCGCTCAGACATGAGATTGTAAGTCT 165627 Query 115254 CCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATT 115313 | | ||| | ||||| | ||||| ||||||| | || ||||| | ||||| | Sbjct 165628 CAATGACCTTGTCAATGTTGGCACCGTGGATACCGACGGCAACACGCATGATCATGTGCT 165687 Query 115314 GGGG 115317 |||| Sbjct 165688 GGGG 165691 >seq1 Length=4122216 Score = 152 bits (168), Expect = 6e-32 Identities = 182/246 (74%), Gaps = 6/246 (2%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || |||||||||||| |||||||||||||| || || |||||| || || Sbjct 3090413 GGCAAAGTCGGTGTGGAGACCCTCATCACGGGAGATGAGCTCGTTGGAGAAGGTGAGACC 3090354 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||||| || |||||||| | |||||| || | || || || ||||||||||| Sbjct 3090353 GGGCATGAGTCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGAGCCGGAGAAGAAGAT 3090294 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222 ||||| || || || || | ||| ||||| || |||| | ||||| ||| Sbjct 3090293 ACCCTCGACGGCGGCAAAGGCGATGAGGCGCTCGGCGAAGGTG---GACTTCTCGTCTGT 3090237 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282 || |||||||| |||||| | ||||| |||| ||| || |||| ||| | ||| || || Sbjct 3090236 AATCCACTTCAGCGCCCAGTCGGCCTTCTTCTTGATGCAGGGGATGGTGTCGATGGCGTC 3090177 Query 126283 AAAGAG 126288 |||||| Sbjct 3090176 AAAGAG 3090171 >seq3 Length=1461739 Score = 98.7 bits (108), Expect = 1e-15 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 ||||| || ||| |||||| ||||| ||||| || ||| ||||| |||||||||||| Sbjct 1187740 CCCTCATCTCGGCTGATGAGCTCATTGGAGAATGTCAATCCAGGCATCAGACCCCGCTTC 1187681 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 |||||||| || || || || || |||||||||||||| || || || || ||||| Sbjct 1187680 TTCAACCAAAAGATAGCGGCGAAGGAGCCCGAGAAGAAGATGCCTTCTACGCAAGCGAAA 1187621 Query 126185 GC 126186 || Sbjct 1187620 GC 1187619 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353211720160